; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24441 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24441
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionphotosystem II 22 kDa protein, chloroplastic-like
Genome locationCarg_Chr04:18388536..18390560
RNA-Seq ExpressionCarg24441
SyntenyCarg24441
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602094.1 Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.6e-144100Show/hide
Query:  MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]3.0e-12988.41Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLPS SVSLP RGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]2.0e-146100Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]5.0e-14599.27Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMVLSSGVCASHGVALKREIASLT+RLRPNAQ SRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]1.7e-13290.55Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+L+SGVC  HGV +KRE+     RLRPNAQFSRLFFNPLPS SVSLPARGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGE ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein1.4e-12988.41Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLPS SVSLP RGF TLA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic4.2e-12988.41Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A5A7UZ08 Photosystem II 22 kDa protein4.2e-12988.41Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like9.9e-147100Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like2.4e-14599.27Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMVLSSGVCASHGVALKREIASLT+RLRPNAQ SRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic1.6e-10674.73Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVVKPKE--KVEDGIFGTSGGIGF
        AQTM+L++           R   SL +RL+P    S LF   LP    SSS +  +  F   T+A+FKSKAK P KKV  PKE  KVEDGIFGTSGGIGF
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVVKPKE--KVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGLE+AVIPPGK  +SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q02060 Photosystem II 22 kDa protein, chloroplastic3.8e-11176.9Show/hide
Query:  MAAQTMVLSSGVCASHGVALKRE--IASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQN
        MA   +++  GV  ++ + LKR   +    Q+++P +  S LFF+PLPSSS S  +  F+TLA+FKSKAK P KKV KPK KVEDG+FGTSGGIGFTK+N
Subjt:  MAAQTMVLSSGVCASHGVALKRE--IASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AVIPPGK +RSALGLK  GPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKF+TD+EE+
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic1.3e-10674.73Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVVKPKE--KVEDGIFGTSGGIGF
        AQTM+L++           R   SL +RL+P    S LF   LP    SS+ +  +  F   T+A+FKSKAK P KKV  PKE  KVEDGIFGTSGGIGF
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVVKPKE--KVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGLE+AVIPPGK  +SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic2.2e-10675.36Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNP-----LPSSSVSLPAR-GFRTLAIFKSKAKVPAKKVV-KPKEKVEDGIFGTSGGIGFT
        AQTM+L++           R   SL +RL+P    S  FF P      PS+S S  +     T+A+FKSKAK PAKKVV KPKEKVEDGIFGTSGGIGFT
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNP-----LPSSSVSLPAR-GFRTLAIFKSKAKVPAKKVV-KPKEKVEDGIFGTSGGIGFT

Query:  KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGG
        KQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL++AVIPPGKG +SALGL EGG
Subjt:  KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGG

Query:  PLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        PLF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N++FFF+AA+NPGTGKFVTDEEE+
Subjt:  PLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q9XF91 Photosystem II 22 kDa protein, chloroplastic3.8e-10374.18Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        AQTM+L+SGV A H +  K  +A          +   LF +   +S V+LP+R   F  LA+FK K K   KKV KPK KVEDGIFGTSGGIGFTK NEL
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK +RSALGLKE GPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein2.7e-10474.18Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        AQTM+L+SGV A H +  K  +A          +   LF +   +S V+LP+R   F  LA+FK K K   KKV KPK KVEDGIFGTSGGIGFTK NEL
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK +RSALGLKE GPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

AT1G44575.2 Chlorophyll A-B binding family protein3.0e-6369.74Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        AQTM+L+SGV A H +  K  +A          +   LF +   +S V+LP+R   F  LA+FK K K   KKV KPK KVEDGIFGTSGGIGFTK NEL
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGG
        FVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK +RSALGLKE G
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGGTTCTTTCCTCCGGTGTGTGCGCCAGCCATGGCGTAGCGTTGAAGAGAGAAATCGCTTCGTTGACTCAGAGGCTTAGACCTAACGCCCAATT
TAGTCGCTTGTTTTTCAATCCTCTGCCTTCGAGTTCCGTTTCTTTACCTGCGCGTGGATTTAGGACTCTTGCGATCTTTAAATCGAAGGCGAAAGTGCCGGCGAAGAAGG
TTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGGACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTGTTCGTCGGCCGTGTCGCCATGATCGGCTTT
GCTGCGTCGTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTGGCTCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAAGCGGAGCCTCTTCTTCTGTTCTTCAT
CTTATTCACTCTTCTCGGAGCCATCGGAGCGCTAGGAGACCGTGGAAAATTCATCGACGATCCAGAACCAGCCACCGGACTGGAACGCGCCGTTATCCCTCCCGGCAAGG
GCCTCAGATCGGCGTTAGGTCTTAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCGAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTG
ATCGGAGAAATTATTACAGGTAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCGCTGGTTTTGTTGAACGTTCTGTTTTTCTT
CATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACTGACGAGGAAGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATACACTCAAAATCCCTCTGTTCCTCAGATCCATCTTCTTTAAAACCCATCCAAAATCCCTACCCATTTGCTCAAGCTTTAACGAACTCCCCTGCATTGTTTCGCATCAA
AAGCACAGCATTCATGGCGGCTCAAACCATGGTTCTTTCCTCCGGTGTGTGCGCCAGCCATGGCGTAGCGTTGAAGAGAGAAATCGCTTCGTTGACTCAGAGGCTTAGAC
CTAACGCCCAATTTAGTCGCTTGTTTTTCAATCCTCTGCCTTCGAGTTCCGTTTCTTTACCTGCGCGTGGATTTAGGACTCTTGCGATCTTTAAATCGAAGGCGAAAGTG
CCGGCGAAGAAGGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGGACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTGTTCGTCGGCCGTGTCGC
CATGATCGGCTTTGCTGCGTCGTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTGGCTCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAAGCGGAGCCTCTTC
TTCTGTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCGCTAGGAGACCGTGGAAAATTCATCGACGATCCAGAACCAGCCACCGGACTGGAACGCGCCGTTATC
CCTCCCGGCAAGGGCCTCAGATCGGCGTTAGGTCTTAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCGAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTT
TGCGTTCTCGCTGATCGGAGAAATTATTACAGGTAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCGCTGGTTTTGTTGAACG
TTCTGTTTTTCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACTGACGAGGAAGAGGATTAATGAATGGATCGATTCTGCTTTAGTTTCTCTGTACATGAA
CTTAGAGTTTGTGCAGTTTTAGCGTATTTATTTTGCATCAGCGCCCAAAAACAACGAATCTAAGGAACAAACCTTGGCTAGTGAATTGTAGGAAACCTGCAATATTTCTT
TAAATTTGAGGCACAACTTGATAAGATAATCAATTTTGATTTAATTTCT
Protein sequenceShow/hide protein sequence
MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGF
AASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSL
IGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED