; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24459 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24459
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin-fold modifier 1
Genome locationCarg_Chr04:18293669..18296153
RNA-Seq ExpressionCarg24459
SyntenyCarg24459
Gene Ontology termsGO:1990592 - protein K69-linked ufmylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005375 - Ubiquitin-fold modifier 1
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV76212.1 Thaumatin domain-containing protein/Ufm1 domain-containing protein [Cephalotus follicularis]3.1e-4195.65Show/hide
Query:  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR
        G GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+GS++
Subjt:  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR

XP_004140331.1 ubiquitin-fold modifier 1 [Cucumis sativus]1.8e-41100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

XP_022141697.1 ubiquitin-fold modifier 1 [Momordica charantia]2.5e-4396.84Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

XP_022990075.1 ubiquitin-fold modifier 1-like [Cucurbita maxima]1.1e-4198.9Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA G
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG

XP_023547732.1 ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo]2.3e-44100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

TrEMBL top hitse value%identityAlignment
A0A0A0KTD7 Ubiquitin-fold modifier 18.7e-42100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

A0A6J1CKK3 Ubiquitin-fold modifier 11.2e-4396.84Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

A0A6J1FF53 Ubiquitin-fold modifier 18.7e-42100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

A0A6J1JP49 Ubiquitin-fold modifier 15.1e-4298.9Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA G
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG

A0A6J1JXE3 Ubiquitin-fold modifier 18.7e-42100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

SwissProt top hitse value%identityAlignment
Q176V0 Ubiquitin-fold modifier 14.0e-3689.02Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        KV+FK+TLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+DG+GINPQQ+AGNVFLKHGSELRLIPRDRVG+
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Q5PU89 Ubiquitin-fold modifier 14.8e-3786.67Show/hide
Query:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR
        G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ+AGNVFLKHGSELRLIPRDRVG +   R
Subjt:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR

Q94DM8 Ubiquitin-fold modifier 12.4e-4197.67Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        AGGGKVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Q94EY2 Ubiquitin-fold modifier 11.1e-3688.51Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR
        KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ AGNVFLKHGSELRLIPRDRVG     R
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR

Q9CA23 Ubiquitin-fold modifier 11.2e-4096.51Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Arabidopsis top hitse value%identityAlignment
AT1G77710.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).8.6e-4296.51Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGT
CCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCAATGTCTTCCTCA
AGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGT
CCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCAATGTCTTCCTCA
AGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAAACTACAATACTCGCCTTAGTCAACTGGCTCCACACTTTTTTT
TATCACATTACTGCAATTGATGAGATGAGAACCAATGTCTGCTTATCCTTTCGATTTCACTAG
Protein sequenceShow/hide protein sequence
MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM