CuGenDBv2

Gene ID	Carg24465
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ABC1 domain-containing protein
Genome location	Carg_Chr04:516497..517200
RNA-Seq Expression	Carg24465
Synteny	Carg24465
Gene Ontology terms	GO:0007005 - mitochondrion organization (biological process) GO:0055088 - lipid homeostasis (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0032592 - integral component of mitochondrial membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600867.1 putative aarF domain-containing protein kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-14

77.61

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASIS+EDYE MASALIQMGATNND   DLDTEI       GR  STAVAANI+VDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIA-----RGRKDSTAVAANILVDERQMNKL

KAG7030614.1 putative aarF domain-containing protein kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.1e-25

100

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIARGRKDSTAVAANILVDERQMNKLLCS
        MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIARGRKDSTAVAANILVDERQMNKLLCS
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIARGRKDSTAVAANILVDERQMNKLLCS

XP_004146430.1 uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Cucumis sativus]

2.2e-14

67.07

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASI++EDYE MASALIQMGATNNDVNA               DLDTEI       GR  STAVAANILVDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

XP_008456971.1 PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Cucumis melo]

2.2e-14

67.07

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASI++EDYE MASALIQMGATNNDVNA               DLDTEI       GR  STAVAANILVDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

XP_038892843.1 uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Benincasa hispida]

2.2e-14

67.07

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASI++EDYE MASALIQMGATNNDVNA               DLDTEI       GR  STAVAANILVDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMB7 ABC1 domain-containing protein

1.1e-14

67.07

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASI++EDYE MASALIQMGATNNDVNA               DLDTEI       GR  STAVAANILVDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

A0A1S3C5P7 uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic

1.1e-14

67.07

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASI++EDYE MASALIQMGATNNDVNA               DLDTEI       GR  STAVAANILVDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

A0A5D3DRP0 Putative aarF domain-containing protein kinase

1.1e-14

67.07

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASI++EDYE MASALIQMGATNNDVNA               DLDTEI       GR  STAVAANILVDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

A0A6J1FSC0 uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic

2.4e-14

65.85

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASIS+EDYE MASALIQMGATNNDVN+               DLDTEI       GR  STAVAANI+VDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

A0A6J1JGV2 uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic

2.4e-14

65.85

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL
        MDVFLASIS+EDYE MASALIQMGATNNDVN+               DLDTEI       GR  STAVAANI+VDERQMNKL
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEIA-----RGRKDSTAVAANILVDERQMNKL

SwissProt top hits

e value

%identity

Alignment

Q9ASX5 Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic

2.8e-12

56.1

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEI----ARG-RKDSTAVAANILVDERQMNKL
        M+VFLASI++E+YE MASALIQMGATN DV+                +LDTEI    ARG   D+TAVAAN+++DERQMN L
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEI----ARG-RKDSTAVAANILVDERQMNKL

Arabidopsis top hits

e value

%identity

Alignment

AT5G05200.1 Protein kinase superfamily protein

2.0e-13

56.1

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Query:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEI----ARG-RKDSTAVAANILVDERQMNKL
        M+VFLASI++E+YE MASALIQMGATN DV+                +LDTEI    ARG   D+TAVAAN+++DERQMN L
Subjt:  MDVFLASISSEDYEQMASALIQMGATNNDVNA---------------DLDTEI----ARG-RKDSTAVAANILVDERQMNKL

Sequences

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CDS sequence

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ATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACAAATGGCATCTGCCCTCATCCAAATGGGTGCCACGAATAATGACGTCAATGCTGATTTGGATACTGA
AATAGCGAGAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAG

mRNA sequence

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ATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACAAATGGCATCTGCCCTCATCCAAATGGGTGCCACGAATAATGACGTCAATGCTGATTTGGATACTGA
AATAGCGAGAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAGCCGACAAAGTTCATAAACTTCA
GGGTACACAGTGCAGGTATGCTTTTGCATAGAACATCAGTCCTTAGTCTATATAATCAGAAAGTTTGTGTTTTAGAACCACGAGTATTGAATACTTCTGAATAATGATCA
CTAGTAAAATGGTCCTTCCTTGCAACTTGAGTTTTGTATTTTTCATTGAAGTCCTAAAATGAAGTAAGACTGAGAGCCTAGGAAAGAAGAATACATTCATGAACCTCTTG
AACCATACATTAAGACAAGTTGCTAATTTGGACCACTTTTCTCTCC

Protein sequence

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MDVFLASISSEDYEQMASALIQMGATNNDVNADLDTEIARGRKDSTAVAANILVDERQMNKLLCS

Carg24465 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome