; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24466 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24466
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:517538..517942
RNA-Seq ExpressionCarg24466
SyntenyCarg24466
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599936.1 hypothetical protein SDJN03_05169, partial [Cucurbita argyrosperma subsp. sororia]6.0e-6797.76Show/hide
Query:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
        MQVSPFFHRPSAVVFPKFRPVST+SPPWLRRQAAAPRCVSPGGWGSSV ELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIM EDEGRDP
Subjt:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP

Query:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEEEG
        TDYHRRAKIFSTSSRVFQALKQHSDDESEEEEEG
Subjt:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEEEG

KAG7030615.1 hypothetical protein SDJN02_04652, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-68100Show/hide
Query:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
        MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
Subjt:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP

Query:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEEEG
        TDYHRRAKIFSTSSRVFQALKQHSDDESEEEEEG
Subjt:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEEEG

XP_022941969.1 uncharacterized protein LOC111447176 [Cucurbita moschata]2.5e-6597.73Show/hide
Query:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
        MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVS GGWGSSV ELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
Subjt:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP

Query:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEE
        TDYHRRAKIFSTSSRVFQALKQHSDDESEE E
Subjt:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEE

XP_022988679.1 uncharacterized protein LOC111485933 [Cucurbita maxima]1.0e-4276.23Show/hide
Query:  FFHRPSAVVFPKFRPVSTVSPPWLRRQ--AAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDY
        FFHR S VVFPK RP+S +SPPW  R+  AAAPRCVS GGWG SV E E       EEWLKLGRL+EKCG GGKG+VELLE LEREAIMGEDEGR+PTDY
Subjt:  FFHRPSAVVFPKFRPVSTVSPPWLRRQ--AAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDY

Query:  HRRAKIFSTSSRVFQALKQHSD
        +RRAKIFSTSS VFQALKQHSD
Subjt:  HRRAKIFSTSSRVFQALKQHSD

XP_023541783.1 uncharacterized protein LOC111801831 [Cucurbita pepo subsp. pepo]1.8e-6394.7Show/hide
Query:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
        MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQ AAPRCVS GGWGSSV ELERE SVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
Subjt:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP

Query:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEE
        T+YHRRAKIFSTSSRVFQALK+HSDDESEE E
Subjt:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEE

TrEMBL top hitse value%identityAlignment
A0A0A0KQQ4 Uncharacterized protein1.3e-3870.4Show/hide
Query:  PFFHRPSAVVFPKFRPVSTVSPPWL----RRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
        P  HRPS   FP  RP  ++S PWL        A PRCVS GGWGSSV   E    V+ EEWLKLGRLEEKCG GGKG+VELLE LE+EAIMGEDEGRDP
Subjt:  PFFHRPSAVVFPKFRPVSTVSPPWL----RRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP

Query:  TDYHRRAKIFSTSSRVFQALKQHSD
        TDY+RRAKIFSTSS VFQALKQHSD
Subjt:  TDYHRRAKIFSTSSRVFQALKQHSD

A0A6J1D0H7 uncharacterized protein LOC1110159262.2e-3873.39Show/hide
Query:  PFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDYH
        P  HRPSAV   KFRP S +SP W RR+  A RCVS GGWGS   ELERE++ EGEEWLKLGRL+EKCG GGKG+VELLE LE EAIMGEDEGRDP DY 
Subjt:  PFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDYH

Query:  RRAKIFSTSSRVFQALKQHSDDES
        RRAKIFSTSS+VFQALKQ + D S
Subjt:  RRAKIFSTSSRVFQALKQHSDDES

A0A6J1FPZ7 uncharacterized protein LOC1114471761.2e-6597.73Show/hide
Query:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
        MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVS GGWGSSV ELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP
Subjt:  MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDP

Query:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEE
        TDYHRRAKIFSTSSRVFQALKQHSDDESEE E
Subjt:  TDYHRRAKIFSTSSRVFQALKQHSDDESEEEE

A0A6J1FW01 uncharacterized protein LOC1114478171.9e-4276.42Show/hide
Query:  PFFHRPSAVVFPKFRPVSTVSPPWLRRQ--AAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTD
        PFFHR S VVF K RP+S +SP WL R+  AAAPRCVS GGWG SV E       E EEWLKLGRLEEKCG GGKG+VELLE LEREAIMGEDEGR+PTD
Subjt:  PFFHRPSAVVFPKFRPVSTVSPPWLRRQ--AAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTD

Query:  YHRRAKIFSTSSRVFQALKQHSD
        Y+RRAKIFSTSS VFQALKQHSD
Subjt:  YHRRAKIFSTSSRVFQALKQHSD

A0A6J1JM89 uncharacterized protein LOC1114859335.0e-4376.23Show/hide
Query:  FFHRPSAVVFPKFRPVSTVSPPWLRRQ--AAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDY
        FFHR S VVFPK RP+S +SPPW  R+  AAAPRCVS GGWG SV E E       EEWLKLGRL+EKCG GGKG+VELLE LEREAIMGEDEGR+PTDY
Subjt:  FFHRPSAVVFPKFRPVSTVSPPWLRRQ--AAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDY

Query:  HRRAKIFSTSSRVFQALKQHSD
        +RRAKIFSTSS VFQALKQHSD
Subjt:  HRRAKIFSTSSRVFQALKQHSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein2.4e-1339.02Show/hide
Query:  PSAVVFPKFRPVSTVSPPWL------RRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSG-GKGMVELLESLEREAIMGEDEGRDPTD
        PS  ++    PV+ +    L       R  AA RCV+ G   ++ +E      +  EE  +L +    CG    +G+ ELLE LE+EAIMG D+GRDP D
Subjt:  PSAVVFPKFRPVSTVSPPWL------RRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSG-GKGMVELLESLEREAIMGEDEGRDPTD

Query:  YHRRAKIFSTSSRVFQALKQHSD
        Y+RRAKIF  SS++F+ L +  D
Subjt:  YHRRAKIFSTSSRVFQALKQHSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTCTCACCCTTCTTCCACCGCCCATCCGCCGTCGTCTTCCCCAAATTCAGGCCTGTTTCAACGGTTTCCCCGCCATGGCTACGCCGTCAGGCTGCGGCACCGAG
ATGTGTTAGTCCGGGTGGCTGGGGGAGCTCTGTGGTGGAGCTGGAGAGAGAATTGTCGGTGGAGGGAGAAGAGTGGCTGAAACTAGGGAGGCTAGAGGAGAAATGCGGCA
GTGGAGGAAAAGGAATGGTGGAGTTGCTTGAATCTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTCGAGACCCTACTGATTACCATAGGAGGGCTAAGATTTTC
AGTACCAGTTCTAGAGTTTTTCAAGCTCTTAAGCAACATTCTGATGATGAATCTGAAGAGGAAGAAGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTCTCACCCTTCTTCCACCGCCCATCCGCCGTCGTCTTCCCCAAATTCAGGCCTGTTTCAACGGTTTCCCCGCCATGGCTACGCCGTCAGGCTGCGGCACCGAG
ATGTGTTAGTCCGGGTGGCTGGGGGAGCTCTGTGGTGGAGCTGGAGAGAGAATTGTCGGTGGAGGGAGAAGAGTGGCTGAAACTAGGGAGGCTAGAGGAGAAATGCGGCA
GTGGAGGAAAAGGAATGGTGGAGTTGCTTGAATCTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTCGAGACCCTACTGATTACCATAGGAGGGCTAAGATTTTC
AGTACCAGTTCTAGAGTTTTTCAAGCTCTTAAGCAACATTCTGATGATGAATCTGAAGAGGAAGAAGAAGGATGA
Protein sequenceShow/hide protein sequence
MQVSPFFHRPSAVVFPKFRPVSTVSPPWLRRQAAAPRCVSPGGWGSSVVELERELSVEGEEWLKLGRLEEKCGSGGKGMVELLESLEREAIMGEDEGRDPTDYHRRAKIF
STSSRVFQALKQHSDDESEEEEEG