; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24474 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24474
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUncharacterised conserved protein (UCP030365)
Genome locationCarg_Chr04:550825..552245
RNA-Seq ExpressionCarg24474
SyntenyCarg24474
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599943.1 hypothetical protein SDJN03_05176, partial [Cucurbita argyrosperma subsp. sororia]6.6e-67100Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

KAG7030623.1 hypothetical protein SDJN02_04660, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-74100Show/hide
Query:  MSLHVHDCYSAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAE
        MSLHVHDCYSAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAE
Subjt:  MSLHVHDCYSAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAE

Query:  EEKQLESWLNQVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRTN
        EEKQLESWLNQVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRTN
Subjt:  EEKQLESWLNQVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRTN

XP_022941833.1 uncharacterized protein LOC111447075 [Cucurbita moschata]8.6e-6799.27Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTS+MSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

XP_022995655.1 uncharacterized protein LOC111491122 [Cucurbita maxima]5.6e-6698.54Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESW+N
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMHSDQGLNHVQ RGAAFGSQQSGETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

XP_023532316.1 uncharacterized protein LOC111794504 [Cucurbita pepo subsp. pepo]6.6e-67100Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

TrEMBL top hitse value%identityAlignment
A0A6J1CZG9 uncharacterized protein LOC1110159038.2e-5584.67Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELI QDIKGRLSALRRSKKRVRAVISTEL FLI+KEFP N+ENDPYVAKSS D+TS++S+ADLHQ RW KLF++MDKAL EEEKQLESWLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQ+H DQGLNHVQS  +AFGSQQ GETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

A0A6J1FQI0 uncharacterized protein LOC1114475371.8e-5484.67Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWL+L+HQDIKGRLSALRRSKKRVRAVISTEL FLI+KEFP NEENDPYVAK+SL++TSV+S+ADLHQARW KLF++MDKALAEEEKQLE WLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMH DQGL H QS  AAFGS Q GETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

A0A6J1FT74 uncharacterized protein LOC1114470754.2e-6799.27Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTS+MSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

A0A6J1JA09 uncharacterized protein LOC111482623 isoform X15.3e-5483.94Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWL+L+HQDIKGRLSALRRSKKRVRAVISTEL FLI+KEFP NEENDPYVAK+ L++TSV+S+ADLHQARW KLF++MDKALAEEEKQLE WLN
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMH DQGL H QS  AAFGS Q GETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

A0A6J1K4K0 uncharacterized protein LOC1114911222.7e-6698.54Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
        AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESW+N
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN

Query:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT
        QVKEMQMHSDQGLNHVQ RGAAFGSQQSGETQNDSRT
Subjt:  QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40630.1 Uncharacterised conserved protein (UCP030365)2.5e-1940.14Show/hide
Query:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLI-AKEFPCNEEN--DPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLES
        AATVASQWLE + QD+ GRLSA++ S+ RV+ +++TEL  L  ++E   N+ N  +     +S D +S  +  + HQ RW   F++++KAL +E++ LE 
Subjt:  AATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLI-AKEFPCNEEN--DPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLES

Query:  WLNQVKEMQMHSDQGLNHV--------QSRGAAFGSQQSGET
         LNQVKEMQ   + GL  +        QS  ++FG   + ET
Subjt:  WLNQVKEMQMHSDQGLNHV--------QSRGAAFGSQQSGET

AT5G05240.1 Uncharacterised conserved protein (UCP030365)9.3e-3561.54Show/hide
Query:  SAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWL
        +AATVASQWLEL+HQDIKGR+SALRRS+KRVRAV++ EL  LI KEFP ++ENDP +    L   S  ST D+H++RW  LF +++  L+EEE QLESWL
Subjt:  SAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWL

Query:  NQVKEMQMHSDQGLNHV
        NQV+ MQ H D+GL H+
Subjt:  NQVKEMQMHSDQGLNHV

AT5G65120.1 unknown protein1.7e-0432.11Show/hide
Query:  CYSAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLES
        C    T A  W +L +QDIKGRLS L++S+K        E S LI +        D Y +++S + T+     D    +W  LF  M+  LA E   L +
Subjt:  CYSAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLES

Query:  WLNQVKEMQ
            +KE++
Subjt:  WLNQVKEMQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTACACGTGCACGATTGTTATTCAGCTGCTACCGTTGCTTCTCAATGGTTGGAACTGATACACCAAGACATTAAAGGACGTCTCTCAGCTCTACGACGTAGTAA
AAAAAGGGTTCGAGCTGTAATTTCTACAGAGTTGTCGTTTCTAATAGCTAAAGAATTTCCGTGTAATGAAGAGAACGATCCTTATGTTGCGAAGAGTTCACTCGACAAAA
CTTCGGTTATGTCCACTGCTGATCTCCATCAAGCAAGATGGGCTAAACTGTTTAATGAGATGGATAAAGCTCTTGCTGAAGAAGAGAAACAACTAGAAAGTTGGTTGAAC
CAAGTAAAAGAAATGCAGATGCACTCTGATCAGGGGCTGAACCATGTTCAGTCGAGGGGGGCAGCTTTCGGCTCGCAGCAATCGGGAGAAACACAAAACGATTCGAGGAC
TAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTACACGTGCACGATTGTTATTCAGCTGCTACCGTTGCTTCTCAATGGTTGGAACTGATACACCAAGACATTAAAGGACGTCTCTCAGCTCTACGACGTAGTAA
AAAAAGGGTTCGAGCTGTAATTTCTACAGAGTTGTCGTTTCTAATAGCTAAAGAATTTCCGTGTAATGAAGAGAACGATCCTTATGTTGCGAAGAGTTCACTCGACAAAA
CTTCGGTTATGTCCACTGCTGATCTCCATCAAGCAAGATGGGCTAAACTGTTTAATGAGATGGATAAAGCTCTTGCTGAAGAAGAGAAACAACTAGAAAGTTGGTTGAAC
CAAGTAAAAGAAATGCAGATGCACTCTGATCAGGGGCTGAACCATGTTCAGTCGAGGGGGGCAGCTTTCGGCTCGCAGCAATCGGGAGAAACACAAAACGATTCGAGGAC
TAATTAA
Protein sequenceShow/hide protein sequence
MSLHVHDCYSAATVASQWLELIHQDIKGRLSALRRSKKRVRAVISTELSFLIAKEFPCNEENDPYVAKSSLDKTSVMSTADLHQARWAKLFNEMDKALAEEEKQLESWLN
QVKEMQMHSDQGLNHVQSRGAAFGSQQSGETQNDSRTN