CuGenDBv2

Gene ID	Carg24481
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GATA-N domain-containing protein
Genome location	Carg_Chr04:577466..578445
RNA-Seq Expression	Carg24481
Synteny	Carg24481
Gene Ontology terms	GO:0009658 - chloroplast organization (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0071805 - potassium ion transmembrane transport (biological process) GO:0005634 - nucleus (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0015079 - potassium ion transmembrane transporter activity (molecular function)
InterPro domains	IPR008013 - GATA-type transcription activator, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146444.1 uncharacterized protein LOC101211273 [Cucumis sativus]

8.1e-72

84.09

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAI PSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E GG  +NK+SLFSSVTEALDFS VRS+RDAELLDDARQATKAGGRMSREQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSS  NFF+KFF K
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

XP_022941869.1 uncharacterized protein LOC111447101 [Cucurbita moschata]

2.4e-92

100

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

XP_022996627.1 uncharacterized protein LOC111491808 [Cucurbita maxima]

3.3e-89

96.59

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAISPS+VGFTSQFGQGWKTAREMTPVRSSNLRVSAK+TEKGEEKEDG ERKNKQSLFSSVTEALDFSQVRSSRDAELL+DARQATK+GGRMS+EQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

XP_023532465.1 uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]

2.7e-91

98.86

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAK+TEKGEEKED GERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

XP_038891315.1 uncharacterized protein LOC120080762 [Benincasa hispida]

1.6e-72

84.75

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYG
        MVAISPSH GF SQ  QGWKT R   P RSSNLRV AK+ EKGEE+E  GG  +NK+SLFSSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYG
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKS SSS NFF+K F K
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM41 GATA-N domain-containing protein

3.9e-72

84.09

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAI PSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E GG  +NK+SLFSSVTEALDFS VRS+RDAELLDDARQATKAGGRMSREQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSS  NFF+KFF K
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

A0A1S3C3X8 uncharacterized protein LOC103496731

6.7e-72

84.75

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYG
        MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLFSSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYG
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

A0A5D3DFR3 GATA-N domain-containing protein

6.7e-72

84.75

Show/hide

Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYG
        MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLFSSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYG
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

A0A6J1FPP4 uncharacterized protein LOC111447101

1.2e-92

100

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

A0A6J1K2I3 uncharacterized protein LOC111491808

1.6e-89

96.59

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Query:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA
        MVAISPS+VGFTSQFGQGWKTAREMTPVRSSNLRVSAK+TEKGEEKEDG ERKNKQSLFSSVTEALDFSQVRSSRDAELL+DARQATK+GGRMS+EQYGA
Subjt:  MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G56290.1 unknown protein

3.2e-50

72.18

Show/hide

Query:  KGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTR
        K E+ ED  + + + SLF+ +T+ALDFSQVRS +DAELL +AR+ATK+G +M++EQYGALRRKIGGTYKDFFKSY+EVDGQYVEEGWVDKTCK+CKKDT+
Subjt:  KGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTR

Query:  GEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF
        GEARQVDKLGRYAHV+CL+  N  S NFFT+ F
Subjt:  GEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF

Sequences

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CDS sequence

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ATGGTGGCGATTTCTCCATCGCACGTCGGATTCACATCGCAATTCGGGCAGGGATGGAAGACGGCGAGGGAGATGACTCCCGTCAGAAGCTCGAATCTGAGAGTATCAGC
GAAATCGACGGAGAAGGGCGAGGAGAAAGAAGACGGCGGTGAAAGGAAGAACAAGCAGTCACTGTTTAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGGTCGA
GTCGCGACGCTGAGCTTCTCGATGACGCCCGCCAGGCCACCAAAGCCGGCGGTAGAATGAGCCGGGAACAGTATGGAGCTCTAAGAAGGAAAATAGGAGGGACTTACAAG
GACTTCTTCAAATCCTACATAGAAGTGGATGGGCAATACGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGGGGCGAGGCAAGACAAGT
CGACAAGCTTGGGCGATATGCTCATGTTGCTTGTTTGGAAAAATCCAATTCTTCATCGCCCAATTTCTTCACCAAATTCTTCTTCAAATGA

mRNA sequence

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Protein sequence

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MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYK
DFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK

Carg24481 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome