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Carg24491 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24491
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:612367..614233
RNA-Seq ExpressionCarg24491
SyntenyCarg24491
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600899.1 hypothetical protein SDJN03_06132, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1868.92Show/hide
Query:  LSWRYQFRIP----TDCSNFHGFKLAVTVSPTANLRPGVGVSCKEIRDGKYFSDPPTPRFDKSMSFTSGMMLHL
        LSWRYQ RIP    T C NFHGFKLAV++S +AN RP VGVSC EIRDGK   D PT R D S+SFTS MMLHL
Subjt:  LSWRYQFRIP----TDCSNFHGFKLAVTVSPTANLRPGVGVSCKEIRDGKYFSDPPTPRFDKSMSFTSGMMLHL

KAG7030640.1 hypothetical protein SDJN02_04677, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-85100Show/hide
Query:  MTPPCLLNGRKALEYRSRNQALGFISASFDGFLEATSLPSELSWRYQFRIPTDCSNFHGFKLAVTVSPTANLRPGVGVSCKEIRDGKYFSDPPTPRFDKS
        MTPPCLLNGRKALEYRSRNQALGFISASFDGFLEATSLPSELSWRYQFRIPTDCSNFHGFKLAVTVSPTANLRPGVGVSCKEIRDGKYFSDPPTPRFDKS
Subjt:  MTPPCLLNGRKALEYRSRNQALGFISASFDGFLEATSLPSELSWRYQFRIPTDCSNFHGFKLAVTVSPTANLRPGVGVSCKEIRDGKYFSDPPTPRFDKS

Query:  MSFTSGMMLHLLFDEWNFSKAKFLERGKVNWKSDPLASRKKREKVKNTIRLDGSA
        MSFTSGMMLHLLFDEWNFSKAKFLERGKVNWKSDPLASRKKREKVKNTIRLDGSA
Subjt:  MSFTSGMMLHLLFDEWNFSKAKFLERGKVNWKSDPLASRKKREKVKNTIRLDGSA

KAG7031533.1 hypothetical protein SDJN02_05574, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-0468.42Show/hide
Query:  YQFRIP----TDCSNFHGFKLAVTVSPTANLRPGVGVS
        YQ R+     T+CSNFHGFKL +TVSPTANLRPG GV+
Subjt:  YQFRIP----TDCSNFHGFKLAVTVSPTANLRPGVGVS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCTCCCTGTCTGTTGAATGGCCGGAAAGCGCTCGAGTACCGGTCCCGGAACCAAGCTCTAGGGTTTATCAGCGCAAGTTTCGATGGCTTCCTCGAGGCCACTTC
TTTGCCATCGGAGCTGTCGTGGAGGTACCAGTTCAGGATTCCGACGGACTGCTCGAATTTCCATGGCTTCAAGCTCGCCGTTACGGTCTCTCCGACTGCTAATTTGAGGC
CTGGAGTTGGAGTGAGCTGCAAGGAGATCCGTGATGGAAAATACTTCTCTGATCCGCCGACTCCTCGTTTTGACAAGAGCATGTCGTTCACGAGCGGGATGATGTTGCAC
CTACTCTTTGATGAATGGAATTTTAGTAAAGCAAAGTTTCTAGAACGTGGAAAAGTCAACTGGAAAAGTGATCCATTGGCATCAAGAAAGAAGAGAGAAAAGGTAAAGAA
CACGATAAGATTGGATGGTTCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCCTCCCTGTCTGTTGAATGGCCGGAAAGCGCTCGAGTACCGGTCCCGGAACCAAGCTCTAGGGTTTATCAGCGCAAGTTTCGATGGCTTCCTCGAGGCCACTTC
TTTGCCATCGGAGCTGTCGTGGAGGTACCAGTTCAGGATTCCGACGGACTGCTCGAATTTCCATGGCTTCAAGCTCGCCGTTACGGTCTCTCCGACTGCTAATTTGAGGC
CTGGAGTTGGAGTGAGCTGCAAGGAGATCCGTGATGGAAAATACTTCTCTGATCCGCCGACTCCTCGTTTTGACAAGAGCATGTCGTTCACGAGCGGGATGATGTTGCAC
CTACTCTTTGATGAATGGAATTTTAGTAAAGCAAAGTTTCTAGAACGTGGAAAAGTCAACTGGAAAAGTGATCCATTGGCATCAAGAAAGAAGAGAGAAAAGGTAAAGAA
CACGATAAGATTGGATGGTTCTGCATAG
Protein sequenceShow/hide protein sequence
MTPPCLLNGRKALEYRSRNQALGFISASFDGFLEATSLPSELSWRYQFRIPTDCSNFHGFKLAVTVSPTANLRPGVGVSCKEIRDGKYFSDPPTPRFDKSMSFTSGMMLH
LLFDEWNFSKAKFLERGKVNWKSDPLASRKKREKVKNTIRLDGSA