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Carg24521 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24521
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr19:1811332..1811655
RNA-Seq ExpressionCarg24521
SyntenyCarg24521
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571666.1 hypothetical protein SDJN03_28394, partial [Cucurbita argyrosperma subsp. sororia]6.7e-53100Show/hide
Query:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEELGLRD
        MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEELGLRD
Subjt:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEELGLRD

Query:  QKKGRFH
        QKKGRFH
Subjt:  QKKGRFH

KGN60385.1 hypothetical protein Csa_002007 [Cucumis sativus]6.1e-3062.16Show/hide
Query:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSEL-TPRSYESIKSNNN---IASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEEL
        MNCL+CQALPRTQSDRE+   ET S+  +SCCL++ RRWS+EL TP SY+SIK +++    +S++H+KA+ RR++S+CG  EP+L+R SGMRR+WSFE+L
Subjt:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSEL-TPRSYESIKSNNN---IASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEEL

Query:  GLRDQKKGRFH
        GLR QKKGRFH
Subjt:  GLRDQKKGRFH

XP_008465978.2 PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo]2.7e-2563.96Show/hide
Query:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG
        MNCL+CQALPRTQSDRE +   ET SS  +SCCL++ RRWS+ELTP  +  IK + +I+SS LH+K ++RR +S D G  EPRL+R SGMRR+WSFE+LG
Subjt:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

XP_031737602.1 uncharacterized protein LOC116402474 [Cucumis sativus]6.1e-3062.16Show/hide
Query:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSEL-TPRSYESIKSNNN---IASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEEL
        MNCL+CQALPRTQSDRE+   ET S+  +SCCL++ RRWS+EL TP SY+SIK +++    +S++H+KA+ RR++S+CG  EP+L+R SGMRR+WSFE+L
Subjt:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSEL-TPRSYESIKSNNN---IASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEEL

Query:  GLRDQKKGRFH
        GLR QKKGRFH
Subjt:  GLRDQKKGRFH

XP_038887010.1 uncharacterized protein LOC120077178 [Benincasa hispida]7.9e-3874.77Show/hide
Query:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEELGLRD
        MNCL+CQALPRTQSDRE+   ETSSS  +SCCL++SRRWS+ELTP SYESIK++++I+SSL +KAKNRR+ SDCGR EPRL+R SGMRR+WSFE+LGLRD
Subjt:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEELGLRD

Query:  QKKGRFH
        QKK RFH
Subjt:  QKKGRFH

TrEMBL top hitse value%identityAlignment
A0A0A0LEC0 Uncharacterized protein3.0e-3062.16Show/hide
Query:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSEL-TPRSYESIKSNNN---IASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEEL
        MNCL+CQALPRTQSDRE+   ET S+  +SCCL++ RRWS+EL TP SY+SIK +++    +S++H+KA+ RR++S+CG  EP+L+R SGMRR+WSFE+L
Subjt:  MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSEL-TPRSYESIKSNNN---IASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEEL

Query:  GLRDQKKGRFH
        GLR QKKGRFH
Subjt:  GLRDQKKGRFH

A0A1S3CRL3 uncharacterized protein LOC1035035461.3e-2563.96Show/hide
Query:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG
        MNCL+CQALPRTQSDRE +   ET SS  +SCCL++ RRWS+ELTP  +  IK + +I+SS LH+K ++RR +S D G  EPRL+R SGMRR+WSFE+LG
Subjt:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

A0A5A7T546 Uncharacterized protein1.3e-2563.96Show/hide
Query:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG
        MNCL+CQALPRTQSDRE +   ET SS  +SCCL++ RRWS+ELTP  +  IK + +I+SS LH+K ++RR +S D G  EPRL+R SGMRR+WSFE+LG
Subjt:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

A0A5D3E5T4 Uncharacterized protein1.3e-2563.96Show/hide
Query:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG
        MNCL+CQALPRTQSDRE +   ET SS  +SCCL++ RRWS+ELTP  +  IK + +I+SS LH+K ++RR +S D G  EPRL+R SGMRR+WSFE+LG
Subjt:  MNCLSCQALPRTQSDRE-DEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASS-LHQKAKNRRIQS-DCGRKEPRLIRCSGMRRNWSFEELG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

A0A6J1DZN2 uncharacterized protein LOC1110260677.8e-2356Show/hide
Query:  MNCLSCQALPRTQSDREDE-----AQETSSS--VRQSCCLHISRRWSSELTPRSYESIKSNNNIA--------SSLHQKAKNRRIQSDC---GRKEPRLI
        MNCL+CQALPRTQSDRE+      A ETSSS    +SCCLH++RRWS+ELTP SY  IK+  + A        S   +K K+R ++S        EPRL+
Subjt:  MNCLSCQALPRTQSDREDE-----AQETSSS--VRQSCCLHISRRWSSELTPRSYESIKSNNNIA--------SSLHQKAKNRRIQSDC---GRKEPRLI

Query:  RCSGMRRNWSFEELGLRDQKKGRFH
        R SGMRR+WSFE+L LRDQKKGRFH
Subjt:  RCSGMRRNWSFEELGLRDQKKGRFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46770.1 unknown protein8.8e-1133.86Show/hide
Query:  MNCLSCQALPRTQSDREDEAQ-------ETSSSVRQSCCLHI--SRRWSSELTPRSYESI-KSNNNIASSLH--QKAKNRRIQSDCGR---------KEP
        +NCLSCQALPRT S+++ +         E ++ + ++CC++    R WS  L+PR YE I +  +++A  +   +K  + R+    G          ++P
Subjt:  MNCLSCQALPRTQSDREDEAQ-------ETSSSVRQSCCLHI--SRRWSSELTPRSYESI-KSNNNIASSLH--QKAKNRRIQSDCGR---------KEP

Query:  RLIRCSGMRRNWSFEEL---GLRDQKK
        +L+R +G+RRNWSFE L   GL ++K+
Subjt:  RLIRCSGMRRNWSFEEL---GLRDQKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCCTATCATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGGATGAAGCTCAAGAGACCTCTTCTAGCGTACGCCAATCGTGTTGCCTACACATATCACG
GCGGTGGTCGTCTGAGCTGACACCTCGGTCCTATGAGTCGATCAAATCCAACAACAATATTGCCTCGTCTTTGCACCAGAAGGCCAAGAATCGTCGTATTCAGAGCGATT
GTGGCCGGAAAGAACCGAGGTTGATTCGGTGCTCCGGGATGAGAAGGAATTGGAGCTTTGAGGAGTTGGGGTTGAGAGATCAAAAGAAAGGGAGGTTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCCTATCATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGGATGAAGCTCAAGAGACCTCTTCTAGCGTACGCCAATCGTGTTGCCTACACATATCACG
GCGGTGGTCGTCTGAGCTGACACCTCGGTCCTATGAGTCGATCAAATCCAACAACAATATTGCCTCGTCTTTGCACCAGAAGGCCAAGAATCGTCGTATTCAGAGCGATT
GTGGCCGGAAAGAACCGAGGTTGATTCGGTGCTCCGGGATGAGAAGGAATTGGAGCTTTGAGGAGTTGGGGTTGAGAGATCAAAAGAAAGGGAGGTTCCATTGA
Protein sequenceShow/hide protein sequence
MNCLSCQALPRTQSDREDEAQETSSSVRQSCCLHISRRWSSELTPRSYESIKSNNNIASSLHQKAKNRRIQSDCGRKEPRLIRCSGMRRNWSFEELGLRDQKKGRFH