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Carg24533 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24533
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB41-like
Genome locationCarg_Chr19:1681142..1682123
RNA-Seq ExpressionCarg24533
SyntenyCarg24533
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571650.1 Transcription factor MYB92, partial [Cucurbita argyrosperma subsp. sororia]4.5e-6897.22Show/hide
Query:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
        MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
Subjt:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL

Query:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
        PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEP++ +
Subjt:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

KAG7011379.1 hypothetical protein SDJN02_26284, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-71100Show/hide
Query:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
        MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
Subjt:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL

Query:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQFDS
        PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQFDS
Subjt:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQFDS

XP_022963556.1 transcription factor MYB41-like [Cucurbita moschata]4.5e-6897.22Show/hide
Query:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
        MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
Subjt:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL

Query:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
        PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEP++ +
Subjt:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

XP_022967301.1 transcription factor MYB41-like [Cucurbita maxima]2.7e-6090.21Show/hide
Query:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILP
        LQAELVKLQLLQNLCQLLNPTTP QALP TPLDRLQNPNSNPSRASFSTQN NSSQLQAGFTSGF+S SGF+  DKNKAK+EEMEN DYVQVENYYPILP
Subjt:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILP

Query:  PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
        PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEP++ +
Subjt:  PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

XP_023511538.1 transcription factor MYB41-like [Cucurbita pepo subsp. pepo]1.9e-6695.8Show/hide
Query:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILP
        LQAELVKLQLLQNLCQLLNPTTPSQALP TPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMEN DYVQVENYYPILP
Subjt:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILP

Query:  PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
        PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEP++ +
Subjt:  PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

TrEMBL top hitse value%identityAlignment
A0A0A0LH60 Uncharacterized protein4.8e-2357.5Show/hide
Query:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDK-NKA-KMEEMENLDYV-QVENYYP
        LQAE+ KLQLLQNLCQLLNPTT   A+P T        NSN        QNPN SQ QAG ++GF S SGFE  DK NKA K+EEM + DYV Q ENYY 
Subjt:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDK-NKA-KMEEMENLDYV-QVENYYP

Query:  ILPPLTSES--------------ETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
         LPPL  ES              ETNPL  STNSNSP+ SSSIFDSLESLMN+DE +  +
Subjt:  ILPPLTSES--------------ETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

A0A5D3E6E2 Transcription factor MYB395.3e-2255.9Show/hide
Query:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTS-GFMSGSGFEYEDKNKA-KMEEMENLDYV-QVENYYP
        LQAE+ KLQLLQNLCQLLNPTT   A+P T    + N N          QNPN SQ QAG +S GF   SGFE  DK KA K+EEM + DYV Q ENYY 
Subjt:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTS-GFMSGSGFEYEDKNKA-KMEEMENLDYV-QVENYYP

Query:  ILPPLTSES---------------ETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
         LPPL  ES               ETNPL  STNSNSP+ SSSIFDSLESLMN+DE +  +
Subjt:  ILPPLTSES---------------ETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

A0A6J1BQG2 transcription factor MYB41-like1.1e-2252.67Show/hide
Query:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQV---ENYYP
        LQAE+ KLQLLQNLCQLLN  T    +  + +D LQNP            NPN +Q QAGF++GF+S  GFE   KNKA++E  E  DYVQV   ENYYP
Subjt:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQV---ENYYP

Query:  ILPPLTSESETNPLGC----STNSNSPSSSSSIFDSLESLMNEDEPNQQF
        +LPPL SES  +        S  SNSP++ SSIFDSLESLMN++E N  +
Subjt:  ILPPLTSESETNPLGC----STNSNSPSSSSSIFDSLESLMNEDEPNQQF

A0A6J1HGE6 transcription factor MYB41-like2.2e-6897.22Show/hide
Query:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
        MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL
Subjt:  MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPIL

Query:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
        PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEP++ +
Subjt:  PPLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

A0A6J1HRL9 transcription factor MYB41-like1.3e-6090.21Show/hide
Query:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILP
        LQAELVKLQLLQNLCQLLNPTTP QALP TPLDRLQNPNSNPSRASFSTQN NSSQLQAGFTSGF+S SGF+  DKNKAK+EEMEN DYVQVENYYPILP
Subjt:  LQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILP

Query:  PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF
        PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEP++ +
Subjt:  PLTSESETNPLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACAAGCAGAACTAGTCAAGCTCCAATTACTTCAAAATCTATGCCAACTTCTAAACCCTACCACACCTTCTCAAGCACTACCCGGCACCCCCCTCGATCGCCTTCA
AAACCCTAACTCTAACCCGTCTCGAGCTAGTTTTTCGACCCAAAACCCTAACTCTAGCCAGCTTCAAGCTGGTTTTACGAGCGGGTTCATGTCGGGGTCGGGTTTTGAAT
ACGAGGACAAGAATAAAGCTAAGATGGAAGAAATGGAAAATTTAGATTACGTTCAAGTTGAGAATTATTATCCAATTCTTCCTCCATTGACTTCAGAGAGTGAAACAAAT
CCATTGGGTTGCTCCACCAATTCAAACTCACCTTCTTCATCTTCTTCAATTTTTGATAGCTTGGAGTCTTTGATGAACGAGGACGAACCAAATCAACAATTTGATTCATA
A
mRNA sequenceShow/hide mRNA sequence
ATGTTACAAGCAGAACTAGTCAAGCTCCAATTACTTCAAAATCTATGCCAACTTCTAAACCCTACCACACCTTCTCAAGCACTACCCGGCACCCCCCTCGATCGCCTTCA
AAACCCTAACTCTAACCCGTCTCGAGCTAGTTTTTCGACCCAAAACCCTAACTCTAGCCAGCTTCAAGCTGGTTTTACGAGCGGGTTCATGTCGGGGTCGGGTTTTGAAT
ACGAGGACAAGAATAAAGCTAAGATGGAAGAAATGGAAAATTTAGATTACGTTCAAGTTGAGAATTATTATCCAATTCTTCCTCCATTGACTTCAGAGAGTGAAACAAAT
CCATTGGGTTGCTCCACCAATTCAAACTCACCTTCTTCATCTTCTTCAATTTTTGATAGCTTGGAGTCTTTGATGAACGAGGACGAACCAAATCAACAATTTGATTCATA
A
Protein sequenceShow/hide protein sequence
MLQAELVKLQLLQNLCQLLNPTTPSQALPGTPLDRLQNPNSNPSRASFSTQNPNSSQLQAGFTSGFMSGSGFEYEDKNKAKMEEMENLDYVQVENYYPILPPLTSESETN
PLGCSTNSNSPSSSSSIFDSLESLMNEDEPNQQFDS