; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24539 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24539
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit C
Genome locationCarg_Chr11:135980..136654
RNA-Seq ExpressionCarg24539
SyntenyCarg24539
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587408.1 Nuclear transcription factor Y subunit C-1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-11999.55Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQ
         PSAEDGSYASGGNSGQGNLDGQ
Subjt:  QPSAEDGSYASGGNSGQGNLDGQ

XP_022930013.1 nuclear transcription factor Y subunit C-1-like isoform X1 [Cucurbita moschata]6.0e-120100Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQ
        QPSAEDGSYASGGNSGQGNLDGQ
Subjt:  QPSAEDGSYASGGNSGQGNLDGQ

XP_022930021.1 nuclear transcription factor Y subunit C-1-like isoform X2 [Cucurbita moschata]1.6e-120100Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQR
        QPSAEDGSYASGGNSGQGNLDGQR
Subjt:  QPSAEDGSYASGGNSGQGNLDGQR

XP_023007652.1 nuclear transcription factor Y subunit C-1-like isoform X1 [Cucurbita maxima]1.7e-11999.55Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQS W
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQ
        QPSAEDGSYASGGNSGQGNLDGQ
Subjt:  QPSAEDGSYASGGNSGQGNLDGQ

XP_023007663.1 nuclear transcription factor Y subunit C-1-like isoform X2 [Cucurbita maxima]4.6e-12099.55Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQS W
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQR
        QPSAEDGSYASGGNSGQGNLDGQR
Subjt:  QPSAEDGSYASGGNSGQGNLDGQR

TrEMBL top hitse value%identityAlignment
A0A6J1C352 nuclear transcription factor Y subunit C-1-like1.1e-11195.07Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        ME+NNQAQSSPY    PPPQAPVPAP FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP GVYAQPPSQAWQS W
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQ
        Q +AEDGSYASGG+SGQGNLDGQ
Subjt:  QPSAEDGSYASGGNSGQGNLDGQ

A0A6J1ETU4 nuclear transcription factor Y subunit C-1-like isoform X12.9e-120100Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQ
        QPSAEDGSYASGGNSGQGNLDGQ
Subjt:  QPSAEDGSYASGGNSGQGNLDGQ

A0A6J1EVW5 nuclear transcription factor Y subunit C-1-like isoform X27.6e-121100Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQR
        QPSAEDGSYASGGNSGQGNLDGQR
Subjt:  QPSAEDGSYASGGNSGQGNLDGQR

A0A6J1KZA6 nuclear transcription factor Y subunit C-1-like isoform X18.4e-12099.55Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQS W
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQ
        QPSAEDGSYASGGNSGQGNLDGQ
Subjt:  QPSAEDGSYASGGNSGQGNLDGQ

A0A6J1L8A4 nuclear transcription factor Y subunit C-1-like isoform X22.2e-12099.55Show/hide
Query:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
        MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
Subjt:  MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI

Query:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW
        RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQS W
Subjt:  RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAW

Query:  QPSAEDGSYASGGNSGQGNLDGQR
        QPSAEDGSYASGGNSGQGNLDGQR
Subjt:  QPSAEDGSYASGGNSGQGNLDGQR

SwissProt top hitse value%identityAlignment
A6BLW4 Nuclear transcription factor Y subunit C-22.3e-5860.99Show/hide
Query:  PPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENK
        P P  P     PA   HHLLQQQQ QLQ FW++QRQE E+   +DFKNHQLPLARIKKIMKADEDVRMISAEAP+LFAKACELFILELTIRSWLHAEENK
Subjt:  PPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENK

Query:  RRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSA
        RRTLQ+ND+AAAI RTD+FDFLVDIVPR+E K+E G       GG  GA      A+G+PYYYPPMGQPA       +  PA DP          AWQ  
Subjt:  RRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSA

Query:  WQPSAEDGSYASGGNSGQGNLDG
          P  + G+  S    GQ    G
Subjt:  WQPSAEDGSYASGGNSGQGNLDG

Q8L4B2 Nuclear transcription factor Y subunit C-96.1e-5161.9Show/hide
Query:  FHHLLQQQQ-----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAA
        FH + QQQQ     QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA
Subjt:  FHHLLQQQQ-----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAA

Query:  ITRTDIFDFLVDIVPRDEIKDEA----GLGGMVGATASGVPYYYPPMG-QPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAED
        +TRTDIFDFLVDIVPR++++DE       G +  A A+G PY Y P G  P G P GM++G P     G Y   P    Q  WQ  A D
Subjt:  ITRTDIFDFLVDIVPRDEIKDEA----GLGGMVGATASGVPYYYPPMG-QPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAED

Q9FMV5 Nuclear transcription factor Y subunit C-41.9e-8976.33Show/hide
Query:  NNNQAQSSP---YPPP-------PPPPQAPVP-----APHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
        NNN  Q  P   YPP        PPPP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
Subjt:  NNNQAQSSP---YPPP-------PPPPQAPVP-----APHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF

Query:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA
        AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRPA
Subjt:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA

Query:  MDPIGVYAQPPSQAWQSAWQPSA---EDGSYASGGNSGQGNLDGQ
        MDP GVYAQPPSQAWQS WQ SA   +D SY SGG+SG GNLD Q
Subjt:  MDPIGVYAQPPSQAWQSAWQPSA---EDGSYASGGNSGQGNLDGQ

Q9SMP0 Nuclear transcription factor Y subunit C-11.4e-9281.82Show/hide
Query:  NNNQAQSSPYPPPPPPPQAPVPA----PHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL
        NN Q   S    PPPPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL
Subjt:  NNNQAQSSPYPPPPPPPQAPVPA----PHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL

Query:  TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQA
        TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG PGGMMIGRPAMDP GVY QPPSQA
Subjt:  TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQA

Query:  WQSAWQPS---AEDGSYASGGNSGQGNLDGQ
        WQS WQ S    +D SY SGG+SGQGNLDGQ
Subjt:  WQSAWQPS---AEDGSYASGGNSGQGNLDGQ

Q9ZVL3 Nuclear transcription factor Y subunit C-33.2e-5263.54Show/hide
Query:  PPQAPVPAPHFHHLLQQQQ--QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
        P  +  PA H  H  QQQQ  QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQ
Subjt:  PPQAPVPAPHFHHLLQQQQ--QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ

Query:  KNDIAAAITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAE
        KNDIAAA+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ   QP  E
Subjt:  KNDIAAAITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAE

Arabidopsis top hitse value%identityAlignment
AT1G54830.1 nuclear factor Y, subunit C32.3e-5363.54Show/hide
Query:  PPQAPVPAPHFHHLLQQQQ--QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
        P  +  PA H  H  QQQQ  QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQ
Subjt:  PPQAPVPAPHFHHLLQQQQ--QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ

Query:  KNDIAAAITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAE
        KNDIAAA+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ   QP  E
Subjt:  KNDIAAAITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAE

AT1G54830.2 nuclear factor Y, subunit C32.3e-5363.54Show/hide
Query:  PPQAPVPAPHFHHLLQQQQ--QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
        P  +  PA H  H  QQQQ  QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQ
Subjt:  PPQAPVPAPHFHHLLQQQQ--QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ

Query:  KNDIAAAITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAE
        KNDIAAA+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ   QP  E
Subjt:  KNDIAAAITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAE

AT3G48590.1 nuclear factor Y, subunit C11.0e-9381.82Show/hide
Query:  NNNQAQSSPYPPPPPPPQAPVPA----PHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL
        NN Q   S    PPPPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL
Subjt:  NNNQAQSSPYPPPPPPPQAPVPA----PHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL

Query:  TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQA
        TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG PGGMMIGRPAMDP GVY QPPSQA
Subjt:  TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQA

Query:  WQSAWQPS---AEDGSYASGGNSGQGNLDGQ
        WQS WQ S    +D SY SGG+SGQGNLDGQ
Subjt:  WQSAWQPS---AEDGSYASGGNSGQGNLDGQ

AT5G63470.1 nuclear factor Y, subunit C41.4e-9076.33Show/hide
Query:  NNNQAQSSP---YPPP-------PPPPQAPVP-----APHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
        NNN  Q  P   YPP        PPPP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
Subjt:  NNNQAQSSP---YPPP-------PPPPQAPVP-----APHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF

Query:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA
        AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRPA
Subjt:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA

Query:  MDPIGVYAQPPSQAWQSAWQPSA---EDGSYASGGNSGQGNLDGQ
        MDP GVYAQPPSQAWQS WQ SA   +D SY SGG+SG GNLD Q
Subjt:  MDPIGVYAQPPSQAWQSAWQPSA---EDGSYASGGNSGQGNLDGQ

AT5G63470.2 nuclear factor Y, subunit C41.4e-9076.33Show/hide
Query:  NNNQAQSSP---YPPP-------PPPPQAPVP-----APHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
        NNN  Q  P   YPP        PPPP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF
Subjt:  NNNQAQSSP---YPPP-------PPPPQAPVP-----APHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF

Query:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA
        AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRPA
Subjt:  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA

Query:  MDPIGVYAQPPSQAWQSAWQPSA---EDGSYASGGNSGQGNLDGQ
        MDP GVYAQPPSQAWQS WQ SA   +D SY SGG+SG GNLD Q
Subjt:  MDPIGVYAQPPSQAWQSAWQPSA---EDGSYASGGNSGQGNLDGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCTCCTCCTCCTCCTCAGGCACCCGTCCCGGCCCCTCACTTCCACCACCTCCTCCAGCAGCAGCAGCA
GCAGCTTCAGATGTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTTTGGCTCGCATTAAGAAGATCATGAAAGCCGACG
AGGACGTGCGTATGATCTCCGCCGAAGCGCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATTCTGGAACTCACTATTAGGTCATGGCTTCACGCGGAGGAGAATAAG
AGGCGGACATTGCAGAAGAACGATATTGCGGCGGCCATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTGCCTAGGGATGAAATCAAGGACGAAGCTGGATT
GGGAGGCATGGTCGGAGCCACTGCTAGTGGAGTGCCCTACTATTACCCCCCTATGGGTCAACCGGCAGGGGCTCCCGGGGGGATGATGATTGGGAGACCGGCAATGGATC
CCATCGGAGTTTACGCTCAGCCGCCGTCACAGGCCTGGCAGTCGGCGTGGCAGCCCTCGGCGGAGGACGGTTCTTACGCCAGTGGAGGCAACAGCGGGCAGGGCAATCTT
GATGGTCAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCTCCTCCTCCTCCTCAGGCACCCGTCCCGGCCCCTCACTTCCACCACCTCCTCCAGCAGCAGCAGCA
GCAGCTTCAGATGTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTTTGGCTCGCATTAAGAAGATCATGAAAGCCGACG
AGGACGTGCGTATGATCTCCGCCGAAGCGCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATTCTGGAACTCACTATTAGGTCATGGCTTCACGCGGAGGAGAATAAG
AGGCGGACATTGCAGAAGAACGATATTGCGGCGGCCATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTGCCTAGGGATGAAATCAAGGACGAAGCTGGATT
GGGAGGCATGGTCGGAGCCACTGCTAGTGGAGTGCCCTACTATTACCCCCCTATGGGTCAACCGGCAGGGGCTCCCGGGGGGATGATGATTGGGAGACCGGCAATGGATC
CCATCGGAGTTTACGCTCAGCCGCCGTCACAGGCCTGGCAGTCGGCGTGGCAGCCCTCGGCGGAGGACGGTTCTTACGCCAGTGGAGGCAACAGCGGGCAGGGCAATCTT
GATGGTCAGAGGTAG
Protein sequenceShow/hide protein sequence
MENNNQAQSSPYPPPPPPPQAPVPAPHFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENK
RRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPIGVYAQPPSQAWQSAWQPSAEDGSYASGGNSGQGNL
DGQR