; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24575 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24575
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlycine-rich RNA-binding protein like
Genome locationCarg_Chr19:2204636..2205554
RNA-Seq ExpressionCarg24575
SyntenyCarg24575
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]2.3e-9487.85Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDRGLK+AFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAM+EAIK MNG+DLDGR+ITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRY----GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRS
             RDRGRDFGG RGSN GDCFKCGKPGHFARECPSEGGRGGRYG RDD+Y    G GGGGSGRYGPDRNGDR GGRNR STGDRGGSG+DRYSRDRS
Subjt:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRY----GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRS

Query:  GPYERRGSGGSRSG
        GPYERRGSGG RSG
Subjt:  GPYERRGSGGSRSG

XP_022963831.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita moschata]1.1e-107100Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
        RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
Subjt:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG

Query:  GSRSG
        GSRSG
Subjt:  GSRSG

XP_022967626.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]2.5e-10196.59Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
        RDRGRD G GRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRG TGDRGGSGNDRYSRDRSGPYERR   
Subjt:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG

Query:  GSRSG
        GSRSG
Subjt:  GSRSG

XP_023553985.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita pepo subsp. pepo]2.4e-10799.51Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
        RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
Subjt:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG

Query:  GSRSG
        GSRSG
Subjt:  GSRSG

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]1.1e-9388.21Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDRGLK+AFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAM+EAIK MNG+DLDGR+ITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRY--GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGP
             RDRGRD GG RGSN GDCFKCGKPGHFARECPSEGGRGGRYG RDD+Y  G GGGGSGRYGPDRNGDR GGRNR STGDRGGSG+DRYSRDRSGP
Subjt:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRY--GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGP

Query:  YERRGSGGSRSG
        YERRGSGG RSG
Subjt:  YERRGSGGSRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein1.0e-9287.74Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDRGLK+AFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAM+EAIK MNG+DLDGR+ITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR-GGRYGSRDDRY-GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGP
             RDRGRDFGG RGSN GDCFKCGKPGHFARECPSEGGR GGRYG RDD+Y G GGGG GRYGPDRNGDR GGRNR S+GDRGGSG+DRYSRDRSGP
Subjt:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR-GGRYGSRDDRY-GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGP

Query:  YERRGSGGSRSG
        YERRGSGG RSG
Subjt:  YERRGSGGSRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A1.1e-9487.85Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDRGLK+AFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAM+EAIK MNG+DLDGR+ITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRY----GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRS
             RDRGRDFGG RGSN GDCFKCGKPGHFARECPSEGGRGGRYG RDD+Y    G GGGGSGRYGPDRNGDR GGRNR STGDRGGSG+DRYSRDRS
Subjt:  -----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRY----GSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRS

Query:  GPYERRGSGGSRSG
        GPYERRGSGG RSG
Subjt:  GPYERRGSGGSRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A1.2e-9388.46Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDR LK+AFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAM+EAIK MNG+DLDGR+ITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  ----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYER
            RDR RDFGGGRGSN GDCFKCGKPGHFARECPSEGGRGGRYG RDD+Y SGGGGSGRYGPDRNGDR GGRNR S+GDRGGSG+DR++RDRSGPYER
Subjt:  ----RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYER

Query:  RGSGGSRS
        R SGG RS
Subjt:  RGSGGSRS

A0A6J1HH58 glycine-rich RNA-binding protein RZ1A-like5.2e-108100Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
        RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
Subjt:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG

Query:  GSRSG
        GSRSG
Subjt:  GSRSG

A0A6J1HVL9 glycine-rich RNA-binding protein RZ1A-like1.2e-10196.59Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSG+DHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG
        RDRGRD G GRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRG TGDRGGSGNDRYSRDRSGPYERR   
Subjt:  RDRGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSG

Query:  GSRSG
        GSRSG
Subjt:  GSRSG

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A5.1e-2847.49Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR
        +VEYRCF+GGL+W+T DR L+ AF ++G +L++K++ D+ +GRSRGFGFVTF ++K+M++AI+GMNG DLDGR+ITV++AQ ++GSG         G   
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR

Query:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSG
        GR  GGG  S GG  +  G  G+        GGR G Y      Y S GGG G YG    G R GG   G  G  GG G
Subjt:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSG

Q03250 Glycine-rich RNA-binding protein 76.7e-2844.32Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM++AI+GMNG DLDGR+ITV++AQ                  R
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR

Query:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGR------YGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSG
        G   GGG    GG  ++ G  G ++    S GG GGR      Y      Y S GGG G YG  R  +  GG   G  G  GGSG
Subjt:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGR------YGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSG

Q03251 Glycine-rich RNA-binding protein 87.4e-2748.33Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG         G  R
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR

Query:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGR---YGPDRNGDRSGGRNRGSTGDRGG
        G   GGG  S GG  +  G  G ++      GG GG Y  R   YGSGGGG GR    G  R G   GG + GS G  GG
Subjt:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGR---YGPDRNGDRSGGRNRGSTGDRGG

Q43472 Glycine-rich RNA-binding protein blt8012.3e-2847.37Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR
        +VEYRCF+GGL W+T D+ L++AF K+G ++++K++ D+ +GRSRGFGFVTF   +AM +AI+ MNG DLDGR ITV++AQ  +  G             
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR

Query:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR---GGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRN
        G  FGGG G  GG   + G  G+        GGR   GG YGSRD   G  GGG G YG  R G  SGG N
Subjt:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR---GGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRN

Q9LIN3 Glycine-rich RNA-binding protein RZ1A5.4e-6258.17Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQ-GSGKDHDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL+DAFEK+GHL+EAKVV+DKFSGRSRGFGF+TFDEKKAM+EAI  MNG+DLDGRTITVDKAQP+Q G+G+D+DGD  R
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQ-GSGKDHDGDRPR

Query:  GRDRGRDF-----GGGRGSNGGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGSRDDRYGS
        GRDRG D       GGRG  GGDCFKCGKPGHFARECPSE  R G                                            RY S+DDRYGS
Subjt:  GRDRGRDF-----GGGRGSNGGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGSRDDRYGS

Query:  GGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSGG
          GG  RYGPDR+G+R+GGR+R   G RG  G +R+SR    PY+R  +GG
Subjt:  GGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSGG

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 24.7e-2944.32Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM++AI+GMNG DLDGR+ITV++AQ                  R
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR

Query:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGR------YGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSG
        G   GGG    GG  ++ G  G ++    S GG GGR      Y      Y S GGG G YG  R  +  GG   G  G  GGSG
Subjt:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGR------YGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 26.2e-2947.56Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQP-NQGSGKDHDGDRPRGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM++AI+GMNG DLDGR+ITV++AQ    G G  H G    G  
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQP-NQGSGKDHDGDRPRGRD

Query:  RGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGS--RDDRYGSGGGGSGRYGPDRNG
         GR  GGG  S GG  +             S GG GG YG   R+   G GGG  G YG    G
Subjt:  RGRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGS--RDDRYGSGGGGSGRYGPDRNG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.8e-6358.17Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQ-GSGKDHDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL+DAFEK+GHL+EAKVV+DKFSGRSRGFGF+TFDEKKAM+EAI  MNG+DLDGRTITVDKAQP+Q G+G+D+DGD  R
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQ-GSGKDHDGDRPR

Query:  GRDRGRDF-----GGGRGSNGGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGSRDDRYGS
        GRDRG D       GGRG  GGDCFKCGKPGHFARECPSE  R G                                            RY S+DDRYGS
Subjt:  GRDRGRDF-----GGGRGSNGGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGSRDDRYGS

Query:  GGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSGG
          GG  RYGPDR+G+R+GGR+R   G RG  G +R+SR    PY+R  +GG
Subjt:  GGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 15.2e-2848.33Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG         G  R
Subjt:  EVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDR

Query:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGR---YGPDRNGDRSGGRNRGSTGDRGG
        G   GGG  S GG  +  G  G ++      GG GG Y  R   YGSGGGG GR    G  R G   GG + GS G  GG
Subjt:  GRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGR---YGPDRNGDRSGGRNRGSTGDRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.5e-2440Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +L+ ++++++ +GRSRGFGF+TF +++AM+E+I+ M+G D   R I+V++A+P  G           G
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRG

Query:  RDRG------RDFGGGRGSNG----GDCFKCGKPGHFARECPSE-GGRGGRYG---SRDDRYGSGGGGSGRYGP-----DRN---GDRSGGRNRGSTGDR
        RD G        FGGG G  G     +CFKCG+ GH+AR+CPS  GGRGG  G   SR   YG   G   RY       DR     DR  G  R    DR
Subjt:  RDRG------RDFGGGRGSNG----GDCFKCGKPGHFARECPSE-GGRGGRYG---SRDDRYGSGGGGSGRYGP-----DRN---GDRSGGRNRGSTGDR

Query:  GGS-----GNDRYSRDRSGPYERRGSGGSR
          S       DRY+ DR      R +GG R
Subjt:  GGS-----GNDRYSRDRSGPYERRGSGGSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGGTGGAGTATCGCTGTTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTTTGAAAGATGCGTTTGAAAAGTTTGGCCATCTTCTCGAGGCCAA
GGTAGTTGTTGACAAGTTTTCTGGACGTTCTCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGAAGAGGCAATCAAAGGCATGAATGGAATTGATTTAG
ATGGCCGGACTATTACAGTTGATAAGGCTCAGCCAAACCAAGGTTCAGGTAAAGATCATGATGGTGATCGTCCACGTGGTCGTGATCGAGGTCGGGATTTTGGAGGTGGA
CGTGGATCTAACGGTGGAGATTGCTTTAAATGCGGGAAGCCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTAGATATGGAAGTAGGGATGACAG
ATATGGTAGTGGTGGTGGTGGCAGTGGTCGATATGGTCCAGATAGAAATGGAGATAGATCTGGTGGGCGCAATCGGGGTAGTACCGGTGATCGAGGAGGTTCAGGAAATG
ATCGATATAGTCGTGACCGCTCTGGGCCATATGAGCGACGTGGTTCTGGTGGTTCTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGAGGTGGAGTATCGCTGTTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTTTGAAAGATGCGTTTGAAAAGTTTGGCCATCTTCTCGAGGCCAA
GGTAGTTGTTGACAAGTTTTCTGGACGTTCTCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGAAGAGGCAATCAAAGGCATGAATGGAATTGATTTAG
ATGGCCGGACTATTACAGTTGATAAGGCTCAGCCAAACCAAGGTTCAGGTAAAGATCATGATGGTGATCGTCCACGTGGTCGTGATCGAGGTCGGGATTTTGGAGGTGGA
CGTGGATCTAACGGTGGAGATTGCTTTAAATGCGGGAAGCCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTAGATATGGAAGTAGGGATGACAG
ATATGGTAGTGGTGGTGGTGGCAGTGGTCGATATGGTCCAGATAGAAATGGAGATAGATCTGGTGGGCGCAATCGGGGTAGTACCGGTGATCGAGGAGGTTCAGGAAATG
ATCGATATAGTCGTGACCGCTCTGGGCCATATGAGCGACGTGGTTCTGGTGGTTCTCGTTCTGGATAG
Protein sequenceShow/hide protein sequence
MAEEVEYRCFIGGLSWSTSDRGLKDAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIKGMNGIDLDGRTITVDKAQPNQGSGKDHDGDRPRGRDRGRDFGGG
RGSNGGDCFKCGKPGHFARECPSEGGRGGRYGSRDDRYGSGGGGSGRYGPDRNGDRSGGRNRGSTGDRGGSGNDRYSRDRSGPYERRGSGGSRSG