; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24583 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24583
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpentatricopeptide repeat-containing protein At4g18975, chloroplastic
Genome locationCarg_Chr19:2298226..2309924
RNA-Seq ExpressionCarg24583
SyntenyCarg24583
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571702.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]3.1e-16498.99Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRF DKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFK+LEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNS LMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

XP_022963531.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita moschata]1.5e-166100Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

XP_022963532.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucurbita moschata]5.6e-15896.62Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDK          TSERNIGDIRKHQIGENVSRKDKIDFLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

XP_022967610.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita maxima]5.2e-16498.31Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQ+MELGVNKLQIGNSCYCTMLQNQM KRF DKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKI+FLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFK+LEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

XP_023511579.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]2.2e-16297.97Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRD TVGQIMELGVNKLQIGNS YCTMLQNQMSKRF DKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKI+FLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHAL VLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFK+LEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

TrEMBL top hitse value%identityAlignment
A0A1S3C174 pentatricopeptide repeat-containing protein At4g18975, chloroplastic3.6e-13481.73Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+  DKD  +KDV+NSK L   SE+NIGDIRKH+IGENVSRKDKI FLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH LA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKY--------KGKRKSTKGNQDNSDLM
        CRSMI+IYYRNKMLEDLVKLFK+LEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKY        K KRKSTKG++DNS+L+
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKY--------KGKRKSTKGNQDNSDLM

Query:  K
        K
Subjt:  K

A0A6J1HFH8 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X22.7e-15896.62Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDK          TSERNIGDIRKHQIGENVSRKDKIDFLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

A0A6J1HGC4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X17.1e-167100Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

A0A6J1HSN2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X29.6e-15694.93Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQ+MELGVNKLQIGNSCYCTMLQNQM KRF DKDMTDK          TSERNIGDIRKHQIGENVSRKDKI+FLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFK+LEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

A0A6J1HUZ4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.5e-16498.31Show/hide
Query:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT
        MLIRRFHRAATWATPLLRDTTVGQ+MELGVNKLQIGNSCYCTMLQNQM KRF DKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKI+FLVNT
Subjt:  MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNT

Query:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
        CRSMISIYYRNKMLEDLVKLFK+LEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ
Subjt:  CRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic6.9e-3441.53Show/hide
Query:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +   AL +L K +QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY
        P +L   MI++Y  + + + ++++F ++E     P E S  +RVA A   L   E ++    R L +Y Y++ + ++  +K+Y
Subjt:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY

Q8LG95 Pentatricopeptide repeat-containing protein At4g211906.7e-2936.98Show/hide
Query:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        ++  +  L + KE VYGALD+++AWE +FP+  +K AL +LE E +W +++QV KWMLSKGQG TM  Y  L+ AL  D+R +EA + W       L   
Subjt:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDN
        P +    MISIYY+  M + L ++F ++E  G K P  +IV  V      L + ++ E+++ KY        +   +  KG+R   K  Q N
Subjt:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDN

Arabidopsis top hitse value%identityAlignment
AT1G04590.1 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1)8.0e-7856.7Show/hide
Query:  LGVNK------LQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNTLMDLRDSKEAVYGALDAWVAW
        LGVN+      L++ +  Y  +  +  S +   K+  ++D ++S     + + N  + RKHQIGEN+ +KDKI FLVNTL+D+ D+KEAVYGALDAWVAW
Subjt:  LGVNK------LQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNTLMDLRDSKEAVYGALDAWVAW

Query:  EQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLVKLF
        E++FPIASLK  +A LEKE+QWHR+VQVIKW+LSKGQG TM  YGQLIRALDMD RAEEAH  W  K+G+DLHSVPWQLC  M+ IY+RN ML++LVKLF
Subjt:  EQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLVKLF

Query:  KNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLF----TDEKKGSIKKYKGK
        K+LE++ RKPP+K IVQ VADA E+LG+++EKERV+ KY++L     +D+K     + K K
Subjt:  KNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLF----TDEKKGSIKKYKGK

AT1G04590.2 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4)3.3e-7656.06Show/hide
Query:  LGVNK------LQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNTLMDLRDSKEAVYGALDAWVAW
        LGVN+      L++ +  Y  +  +  S +   K+  ++D ++S     + + N  + RKHQIGEN+ +KDKI FLVNTL+D+ D+KEAVYGALDAWVAW
Subjt:  LGVNK------LQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNTLMDLRDSKEAVYGALDAWVAW

Query:  EQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLV---
        E++FPIASLK  +A LEKE+QWHR+VQVIKW+LSKGQG TM  YGQLIRALDMD RAEEAH  W  K+G+DLHSVPWQLC  M+ IY+RN ML++LV   
Subjt:  EQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLV---

Query:  KLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLF----TDEKKGSIKKYKGK
        KLFK+LE++ RKPP+K IVQ VADA E+LG+++EKERV+ KY++L     +D+K     + K K
Subjt:  KLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLF----TDEKKGSIKKYKGK

AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein4.9e-3541.53Show/hide
Query:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +   AL +L K +QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY
        P +L   MI++Y  + + + ++++F ++E     P E S  +RVA A   L   E ++    R L +Y Y++ + ++  +K+Y
Subjt:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein4.9e-3541.53Show/hide
Query:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +   AL +L K +QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY
        P +L   MI++Y  + + + ++++F ++E     P E S  +RVA A   L   E ++    R L +Y Y++ + ++  +K+Y
Subjt:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein4.9e-3541.53Show/hide
Query:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +   AL +L K +QWHRV+Q+ KWMLSKGQG TM  Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLMDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY
        P +L   MI++Y  + + + ++++F ++E     P E S  +RVA A   L   E ++    R L +Y Y++ + ++  +K+Y
Subjt:  PWQLCRSMISIYYRNKMLEDLVKLFKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKE----RVLVKYNYLFTDEKKGSIKKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCATCCGGAGGTTTCATCGAGCAGCGACATGGGCGACGCCTCTGTTGCGAGACACAACTGTAGGACAAATCATGGAGCTTGGAGTCAACAAGCTGCAAATTGGGAA
CTCTTGTTACTGCACAATGTTACAAAATCAAATGTCTAAACGTTTTGGTGATAAAGATATGACAGATAAGGATGTTAACAATAGTAAACCTTTGTACCAGACTTCAGAGC
GAAATATTGGAGACATTAGAAAGCACCAAATTGGGGAAAACGTTTCACGGAAGGACAAAATTGACTTTCTTGTAAATACTCTTATGGATCTGAGAGATAGTAAGGAGGCT
GTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAACAAGACTTTCCAATAGCATCCCTTAAGCATGCATTGGCTGTCCTTGAGAAAGAAAACCAGTGGCATAGAGTTGT
ACAGGTAATCAAATGGATGTTAAGCAAGGGGCAAGGAACCACAATGAATGTCTATGGGCAGTTAATACGGGCTTTAGACATGGACCATCGAGCGGAAGAAGCACATAAGT
TTTGGGTCATGAAAATTGGTTCGGATCTACATTCAGTTCCTTGGCAATTGTGCAGAAGCATGATATCAATATACTACCGAAACAAAATGCTAGAAGATCTTGTGAAGCTT
TTTAAGAATCTTGAAGCTTTTGGGCGTAAACCTCCAGAAAAATCAATAGTGCAAAGGGTAGCAGATGCTTGTGAGATGCTGGGCTTGGTTGAAGAGAAAGAGAGGGTGCT
AGTGAAGTATAATTACCTTTTTACCGATGAGAAGAAAGGGTCCATCAAGAAATATAAGGGAAAAAGAAAATCGACCAAGGGCAATCAAGACAATAGCGACCTTATGAAGA
AGGCTCAATGA
mRNA sequenceShow/hide mRNA sequence
AAAAAACAACGTTGTTTGAGCGTTTTGCCTCGTTACCAGTCGGGACTGTGGCGGTACGACATTTGAAATCAGGGTTTTGCTCTACCATGCTCATCCGGAGGTTTCATCGA
GCAGCGACATGGGCGACGCCTCTGTTGCGAGACACAACTGTAGGACAAATCATGGAGCTTGGAGTCAACAAGCTGCAAATTGGGAACTCTTGTTACTGCACAATGTTACA
AAATCAAATGTCTAAACGTTTTGGTGATAAAGATATGACAGATAAGGATGTTAACAATAGTAAACCTTTGTACCAGACTTCAGAGCGAAATATTGGAGACATTAGAAAGC
ACCAAATTGGGGAAAACGTTTCACGGAAGGACAAAATTGACTTTCTTGTAAATACTCTTATGGATCTGAGAGATAGTAAGGAGGCTGTTTATGGTGCTCTTGATGCCTGG
GTTGCATGGGAACAAGACTTTCCAATAGCATCCCTTAAGCATGCATTGGCTGTCCTTGAGAAAGAAAACCAGTGGCATAGAGTTGTACAGGTAATCAAATGGATGTTAAG
CAAGGGGCAAGGAACCACAATGAATGTCTATGGGCAGTTAATACGGGCTTTAGACATGGACCATCGAGCGGAAGAAGCACATAAGTTTTGGGTCATGAAAATTGGTTCGG
ATCTACATTCAGTTCCTTGGCAATTGTGCAGAAGCATGATATCAATATACTACCGAAACAAAATGCTAGAAGATCTTGTGAAGCTTTTTAAGAATCTTGAAGCTTTTGGG
CGTAAACCTCCAGAAAAATCAATAGTGCAAAGGGTAGCAGATGCTTGTGAGATGCTGGGCTTGGTTGAAGAGAAAGAGAGGGTGCTAGTGAAGTATAATTACCTTTTTAC
CGATGAGAAGAAAGGGTCCATCAAGAAATATAAGGGAAAAAGAAAATCGACCAAGGGCAATCAAGACAATAGCGACCTTATGAAGAAGGCTCAATGAGTGAAATTAAGAG
TTTCTAAATTTATTTTTAATTTTATATCTAATA
Protein sequenceShow/hide protein sequence
MLIRRFHRAATWATPLLRDTTVGQIMELGVNKLQIGNSCYCTMLQNQMSKRFGDKDMTDKDVNNSKPLYQTSERNIGDIRKHQIGENVSRKDKIDFLVNTLMDLRDSKEA
VYGALDAWVAWEQDFPIASLKHALAVLEKENQWHRVVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMISIYYRNKMLEDLVKL
FKNLEAFGRKPPEKSIVQRVADACEMLGLVEEKERVLVKYNYLFTDEKKGSIKKYKGKRKSTKGNQDNSDLMKKAQ