; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24587 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24587
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnuclear transcription factor Y subunit C-2-like
Genome locationCarg_Chr19:2355197..2355955
RNA-Seq ExpressionCarg24587
SyntenyCarg24587
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571707.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. sororia]1.0e-13198.81Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGGV   GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

KAG7011432.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-135100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

XP_022963852.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]2.2e-13198.8Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGGV   GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

XP_022967619.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]1.9e-13097.22Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGG GG GG GGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR DVFDFLVDIIPRDELKEEG GITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQ RPPMPFMPWPHTQP+QQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

XP_023511463.1 nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo]2.9e-13198.41Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGGV   GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGAT QQPRPPMPFMPWPHTQPQQQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein2.3e-11886.89Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQ
        MDQSERSQHQQQSQQPAGGVG      G   YSNPYQTAP+VASGTPAIT+PPT           QLA+QQAQHFHH QQQQ     QMFWANQMQEIEQ
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQ

Query:  TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS
        TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS
Subjt:  TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS

Query:  IPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        +PVVGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQQPRP MPFMPWPHTQPQQQQQ QQ
Subjt:  IPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

A0A1S3C190 nuclear transcription factor Y subunit C-22.3e-11886.89Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQ
        MDQSERSQHQQQSQQPAGGVG      G   YSNPYQTAP+VASGTPAIT+PPT           QLA+QQAQHFHH QQQQ     QMFWANQMQEIEQ
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQ

Query:  TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS
        TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS
Subjt:  TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS

Query:  IPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        +PVVGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQQPRP MPFMPWPHTQPQQQQQ QQ
Subjt:  IPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

A0A5A7SLP2 Nuclear transcription factor Y subunit C-22.3e-11886.89Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQ
        MDQSERSQHQQQSQQPAGGVG      G   YSNPYQTAP+VASGTPAIT+PPT           QLA+QQAQHFHH QQQQ     QMFWANQMQEIEQ
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQ

Query:  TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS
        TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS
Subjt:  TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS

Query:  IPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        +PVVGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQQPRP MPFMPWPHTQPQQQQQ QQ
Subjt:  IPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

A0A6J1HGB3 nuclear transcription factor Y subunit C-2-like1.1e-13198.8Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGGV   GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

A0A6J1HX86 nuclear transcription factor Y subunit C-2-like9.1e-13197.22Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGG GG GG GGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR DVFDFLVDIIPRDELKEEG GITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQ RPPMPFMPWPHTQP+QQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-43.4e-5856.38Show/hide
Query:  QQSQQPAGGVGGAGGAGGAGTYSNPYQTAP-----LVASGTPAITVPPT--------QLAFQQAQHFH----HHQQQQHQMFWANQMQEIEQTTDFKNHS
        + S QP   +G   G         P  T P     + A   PA + P          QL +QQAQ FH      QQ+Q Q FWA ++ +IEQTTDFKNHS
Subjt:  QQSQQPAGGVGGAGGAGGAGTYSNPYQTAP-----LVASGTPAITVPPT--------QLAFQQAQHFH----HHQQQQHQMFWANQMQEIEQTTDFKNHS

Query:  LPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA
        LPLARIKKIMKADEDVRMISAEAPV+FAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PA
Subjt:  LPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA

Query:  D-IPY-YYVPSQHPVGATGMIMGKQLDQANVY-GATAQQPRPP
        D  PY YYVP Q   GA     G+Q     ++     QQ  PP
Subjt:  D-IPY-YYVPSQHPVGATGMIMGKQLDQANVY-GATAQQPRPP

Q8L4B2 Nuclear transcription factor Y subunit C-97.1e-5659.24Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
              N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

Q8LCG7 Nuclear transcription factor Y subunit C-21.2e-6670Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSL
        M+QSE  Q QQQ               G   Y  P  YQ+ P+ A+         + +AFQQA HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+L
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSL

Query:  PLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPA
        PLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP 
Subjt:  PLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPA

Query:  DIPYYYVPSQ
          PYYY+  Q
Subjt:  DIPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-16.7e-5459.69Show/hide
Query:  QTAPLVASGTPAITVPPTQLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTL
        Q  P  A+G P      T  A      +HH    QQQQ Q+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+
Subjt:  QTAPLVASGTPAITVPPTQLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTL

Query:  RSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGK-QLDQANVY
        RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++G+  +D   VY
Subjt:  RSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGK-QLDQANVY

Q9ZVL3 Nuclear transcription factor Y subunit C-31.1e-5156.96Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQH-----QMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
        G   A  Y SNPYQ        T A+T  PT  +   A H  H QQQQ      Q FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQH-----QMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV

Query:  VFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV-PSQHPVGATGMIMGKQL
        VFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+ P   P+G  GM+MG   
Subjt:  VFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV-PSQHPVGATGMIMGKQL

Query:  DQANVYGATAQQPRPPMPFMPWPHTQPQQQ
                 A  P P M    W    P+QQ
Subjt:  DQANVYGATAQQPRPPMPFMPWPHTQPQQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C95.0e-5759.24Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
              N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

AT1G08970.3 nuclear factor Y, subunit C95.0e-5759.24Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
              N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

AT1G08970.4 nuclear factor Y, subunit C95.0e-5759.24Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ
              N  GA      PP P+M  P  Q Q   Q  Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ

AT1G56170.1 nuclear factor Y, subunit C28.3e-6870Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSL
        M+QSE  Q QQQ               G   Y  P  YQ+ P+ A+         + +AFQQA HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+L
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSL

Query:  PLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPA
        PLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP 
Subjt:  PLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPA

Query:  DIPYYYVPSQ
          PYYY+  Q
Subjt:  DIPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C28.3e-6870Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSL
        M+QSE  Q QQQ               G   Y  P  YQ+ P+ A+         + +AFQQA HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+L
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSL

Query:  PLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPA
        PLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP 
Subjt:  PLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPA

Query:  DIPYYYVPSQ
          PYYY+  Q
Subjt:  DIPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCA
AACAGCTCCGTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAA
TGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTCGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGA
ATGATTTCAGCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTT
ACAGAAGAACGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAG
CCTCTATTCCTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCG
AACGTGTACGGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCA
AACAGCTCCGTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAA
TGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTCGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGA
ATGATTTCAGCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTT
ACAGAAGAACGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAG
CCTCTATTCCTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCG
AACGTGTACGGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAGCAATGA
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQPAGGVGGAGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
MISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQA
NVYGATAQQPRPPMPFMPWPHTQPQQQQQQQQ