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Carg24609 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24609
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:10219824..10220192
RNA-Seq ExpressionCarg24609
SyntenyCarg24609
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594391.1 hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4381.45Show/hide
Query:  MWLLWWPKNNASADAKTCTSS--AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAF
        MWLLWWPK N+SA AKT TSS  AAVTATSLA K SSS+CN  AKLLRKLKKR RVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQ+CAF
Subjt:  MWLLWWPKNNASADAKTCTSS--AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAF

Query:  SSRFASNPGNVSHSAPVATVTTSR
        SSRFASNPG VS  AP  TVT SR
Subjt:  SSRFASNPGNVSHSAPVATVTTSR

XP_022925663.1 uncharacterized protein LOC111433012 [Cucurbita moschata]5.8e-61100Show/hide
Query:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
        MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
Subjt:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS

Query:  RFASNPGNVSHSAPVATVTTSR
        RFASNPGNVSHSAPVATVTTSR
Subjt:  RFASNPGNVSHSAPVATVTTSR

XP_022977244.1 uncharacterized protein LOC111477613 [Cucurbita maxima]4.6e-5896.72Show/hide
Query:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
        MWLLWWPKNNAS+ AKTCTSSAAVTATSLARKASSSN NCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
Subjt:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS

Query:  RFASNPGNVSHSAPVATVTTSR
        RFASNPGNVSHSAPV TVTTSR
Subjt:  RFASNPGNVSHSAPVATVTTSR

XP_023518962.1 uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo]2.5e-4381.45Show/hide
Query:  MWLLWWPKNNASADAKTCTSSA--AVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAF
        MWLLWWPK N+SA AKT TSSA  AVTATSLA K SSS+CN  AKLLRKLKKR RVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQ+CAF
Subjt:  MWLLWWPKNNASADAKTCTSSA--AVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAF

Query:  SSRFASNPGNVSHSAPVATVTTSR
        SSRFASNPG VS  AP  TVT SR
Subjt:  SSRFASNPGNVSHSAPVATVTTSR

XP_023543928.1 uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo]2.7e-5897.56Show/hide
Query:  MWLLWWPKNNASADAKTCT-SSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFS
        MWLLWWPKNNASA AKTCT SSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFS
Subjt:  MWLLWWPKNNASADAKTCT-SSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFS

Query:  SRFASNPGNVSHSAPVATVTTSR
        SRFASNPGNVSHSAPV TVTTSR
Subjt:  SRFASNPGNVSHSAPVATVTTSR

TrEMBL top hitse value%identityAlignment
A0A6J1CYQ9 uncharacterized protein LOC1110158128.5e-4280Show/hide
Query:  MWLLWWPKNNASADAKTCTSS--AAVTATSLARKAS-SSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCA
        MWLLWWPK   SA  KT TSS  AAVTATSLA+KAS SS+CNC AKLLRKLKKR RVL ST+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+CA
Subjt:  MWLLWWPKNNASADAKTCTSS--AAVTATSLARKAS-SSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCA

Query:  FSSRFASNPGNVSHSAPVATVTTSR
        FSSRFASNPGN SHS P  TVT SR
Subjt:  FSSRFASNPGNVSHSAPVATVTTSR

A0A6J1EF60 uncharacterized protein LOC1114336473.5e-4380.65Show/hide
Query:  MWLLWWPKNNASADAKTCTSS--AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAF
        MWLLWWPK N+SA AKT TSS  AAVTATSLA K SSS+CN  AKLLRKLKKR RVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQ+C F
Subjt:  MWLLWWPKNNASADAKTCTSS--AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAF

Query:  SSRFASNPGNVSHSAPVATVTTSR
        SSRFASNPG VS  AP  TVT SR
Subjt:  SSRFASNPGNVSHSAPVATVTTSR

A0A6J1EFV9 uncharacterized protein LOC1114330122.8e-61100Show/hide
Query:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
        MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
Subjt:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS

Query:  RFASNPGNVSHSAPVATVTTSR
        RFASNPGNVSHSAPVATVTTSR
Subjt:  RFASNPGNVSHSAPVATVTTSR

A0A6J1IQV7 uncharacterized protein LOC1114776132.2e-5896.72Show/hide
Query:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
        MWLLWWPKNNAS+ AKTCTSSAAVTATSLARKASSSN NCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS
Subjt:  MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSS

Query:  RFASNPGNVSHSAPVATVTTSR
        RFASNPGNVSHSAPV TVTTSR
Subjt:  RFASNPGNVSHSAPVATVTTSR

A0A6J1KS95 uncharacterized protein LOC1114971672.9e-4276.42Show/hide
Query:  MWLLWWPKN-NASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFS
        MWLLWWPKN +A+A + T +++ AV+ATSLA K SSS+CN  AKLLRKLKKR RVL ST GESSS FQCRYDPLSYSLNFDTSGCG LLDEHYYQ+CAFS
Subjt:  MWLLWWPKN-NASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFS

Query:  SRFASNPGNVSHSAPVATVTTSR
        SRFASNPG VS  AP  TVT SR
Subjt:  SRFASNPGNVSHSAPVATVTTSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19980.1 unknown protein3.0e-1544.66Show/hide
Query:  AVTATSLARKAS----SSNC--NCFAKLLRKLKKRSRVL--RSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLD--EHYYQYCAFSSRFASNPGNVSHS
        A TAT++ +K++    + NC   C A+L+RKLKK+ R+L   STA    S+ QCRYDP+SYSLNFD   CG L D  ++Y ++ AFSSR+ +   N+   
Subjt:  AVTATSLARKAS----SSNC--NCFAKLLRKLKKRSRVL--RSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLD--EHYYQYCAFSSRFASNPGNVSHS

Query:  APV
         P+
Subjt:  APV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTCTCTGGTGGCCGAAGAACAACGCCTCCGCCGACGCCAAAACTTGCACATCCTCCGCCGCCGTAACTGCGACTTCGCTCGCCAGGAAGGCCTCCTCCTCCAA
CTGCAACTGCTTCGCCAAACTGTTGCGCAAACTGAAGAAACGCAGCAGAGTACTCCGTAGCACCGCTGGAGAGAGCAGCAGCACCTTCCAATGCCGCTACGATCCTTTGA
GCTACTCTCTTAACTTCGACACCAGCGGCTGCGGAGGCTTGTTAGATGAACATTACTATCAGTACTGCGCTTTCTCATCCAGATTCGCGTCCAATCCAGGAAATGTTTCT
CATTCTGCTCCTGTTGCAACAGTCACTACTTCTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTCTCTGGTGGCCGAAGAACAACGCCTCCGCCGACGCCAAAACTTGCACATCCTCCGCCGCCGTAACTGCGACTTCGCTCGCCAGGAAGGCCTCCTCCTCCAA
CTGCAACTGCTTCGCCAAACTGTTGCGCAAACTGAAGAAACGCAGCAGAGTACTCCGTAGCACCGCTGGAGAGAGCAGCAGCACCTTCCAATGCCGCTACGATCCTTTGA
GCTACTCTCTTAACTTCGACACCAGCGGCTGCGGAGGCTTGTTAGATGAACATTACTATCAGTACTGCGCTTTCTCATCCAGATTCGCGTCCAATCCAGGAAATGTTTCT
CATTCTGCTCCTGTTGCAACAGTCACTACTTCTCGCTAG
Protein sequenceShow/hide protein sequence
MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQYCAFSSRFASNPGNVS
HSAPVATVTTSR