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Carg24639 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24639
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationCarg_Chr06:6936871..6938306
RNA-Seq ExpressionCarg24639
SyntenyCarg24639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]1.0e-2490.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]1.3e-2490.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]4.5e-2590.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REK E+EKAAKKLQAKKN+MKVDGSGK+KKGG GFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]6.7e-29100Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_030457135.1 uncharacterized protein LOC115678006 [Syzygium oleosum]8.4e-2488.89Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDLRREK EKEKAAKKLQAKKNKMKVDGSGKKKKG  GFQVGK+K+KTKLTA AKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein6.3e-2590.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like4.8e-2590.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1D208 uncharacterized protein LOC1110162872.2e-2590.12Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REK E+EKAAKKLQAKKN+MKVDGSGK+KKGG GFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1FV29 uncharacterized protein LOC1114471143.2e-29100Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1IED7 uncharacterized protein LOC1114732883.2e-29100Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein2.1e-2073.75Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
        MSKKNNL++RK QHE++L++EK+ ++K  KKL A KNKMKVDGSGKKKKG  GF VGKKK+KTKLT  AKAKAAQAMELD
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAAAATAATCTTTCGCGCAGGAAGAATCAACATGAATTCGACCTTCGAAGGGAGAAACAAGAAAAAGAAAAGGCTGCGAAAAAGCTCCAAGCAAAGAAGAA
CAAGATGAAGGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGCTGGGTTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACTGCAGCGGCAAAAGCAAAAGCAG
CCCAGGCAATGGAACTTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
AAATATCGGGTTAGGGTTTAAGAAAACGGTGACGTGCGGCGAATCGAGGAAATTTCCGGCGGCCGGGGCGCAACAAAATGTCGAAGAAAAATAATCTTTCGCGCAGGAAG
AATCAACATGAATTCGACCTTCGAAGGGAGAAACAAGAAAAAGAAAAGGCTGCGAAAAAGCTCCAAGCAAAGAAGAACAAGATGAAGGTTGATGGTAGTGGAAAGAAAAA
GAAGGGTGGAGCTGGGTTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACTGCAGCGGCAAAAGCAAAAGCAGCCCAGGCAATGGAACTTGATAAATGAGGTT
Protein sequenceShow/hide protein sequence
MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK