CuGenDBv2

Gene ID	Carg24652
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mesd domain-containing protein
Genome location	Carg_Chr06:7018467..7020459
RNA-Seq Expression	Carg24652
Synteny	Carg24652
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597131.1 hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-115

100

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

XP_008438032.1 PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo]

9.2e-94

80.84

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+  GI KD GFNRFA+GGQRRIHITDDLDDVVDDEED+SWK+WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+MV  IAMQWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T PSE+ EPLH+EL
Subjt:  TNPSEDTEPLHQEL

XP_022942170.1 uncharacterized protein LOC111447309 [Cucurbita moschata]

9.4e-115

99.53

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

XP_022974607.1 uncharacterized protein LOC111473291 [Cucurbita maxima]

3.0e-113

98.6

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRI ITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMV TIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVF+HPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

XP_023540100.1 uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo]

1.6e-114

99.53

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMV TIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7G1 Uncharacterized protein

4.9e-93

79.91

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+ AGI  DVGFNRFA+GGQRR+HITDDLDDVVDDEED+SWK+WGKKKSAS+DFD+PP DLSKM++PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+ V  IAMQWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL+EL EFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T  S+++EPLHQEL
Subjt:  TNPSEDTEPLHQEL

A0A1S3AVD9 uncharacterized protein LOC103483266

4.4e-94

80.84

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+  GI KD GFNRFA+GGQRRIHITDDLDDVVDDEED+SWK+WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+MV  IAMQWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T PSE+ EPLH+EL
Subjt:  TNPSEDTEPLHQEL

A0A5A7TZI6 Mesd domain-containing protein

4.4e-94

80.84

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+  GI KD GFNRFA+GGQRRIHITDDLDDVVDDEED+SWK+WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+MV  IAMQWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T PSE+ EPLH+EL
Subjt:  TNPSEDTEPLHQEL

A0A6J1FVR6 uncharacterized protein LOC111447309

4.6e-115

99.53

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

A0A6J1IAQ9 uncharacterized protein LOC111473291

1.5e-113

98.6

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRI ITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMV TIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVF+HPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G46000.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

5.6e-49

53.48

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Query:  GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILK
        GF R AE  +RRI I+DDLDDV D+EEDESWKEWG KK+ + +FD PPPD + M   +IQ EM KR  G  +GFVKLRLGV RT ++V  IAM+WT++L+
Subjt:  GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILK

Query:  TGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL
        TG I  +FMAVD ST+MF +  G+ + EL+EFV S  E+YE+KIG+Q FRRPGDPP E+V +  Q ++ K  +       +    EL
Subjt:  TGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL

Sequences

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CDS sequence

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mRNA sequence

Show/hide mRNA sequence

ATGAGAATTTGCTTCTCACCTTCATCGCTTCTACCAGTCTTCTTTCTGATCGTCCTCACCGCCGGCATTTTCAAGGATGTCGGATTCAATCGCTTTGCCGAAGGTGGACA
GCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAAGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCGATTTCGACCTCC
CGCCGCCTGATTTATCGAAGATGGAGCTTCCGGAGATCCAGGCTGAGATGATGAAGCGGCAATCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGCGTTCGTCGG
ACTCCGGAGATGGTGGGTACGATTGCAATGCAATGGACGAGAATTCTGAAAACTGGATCAATCGAGGCAAAATTTATGGCGGTAGACCTCAGTACACTCATGTTCACAGT
GGACAGAGGACAAGACTTGGATGAGTTAAAGGAGTTTGTGTTTAGCCATCCCGAATCGTACGAGATCAAAATTGGGGAGCAAGCATTTCGAAGACCTGGAGATCCTCCTG
TTGAGGAAGTCATTGAGATGCTCCAAAAGGATAAGAACAAAGCTGATGACACCAATCCTTCAGAAGATACCGAGCCATTGCATCAAGAATTATAGAACCAATATGGTATC
AATCTCCAGCCTTCAAACTGGGATTTTTGGATTTCTTAATCTGTTTAGCTTTTCAATCTTGTTGTAGCAATTGAATGGAAATTACTGCAAAAATAAGTTCTTGCCCCTTA
TTACATAGGAATTATTGTCCATAGACCCCTGGGGACTCTAGGATTTTGCTCTCCAGTCCCTGTATTTGGGCTTCTTTTTTCATTCGGGTATTTGATTTTTAAATATTATT
TTGGTCCGTGTATTATTAGGTCTCATTCCATTTTAGTCCGTGCAAACT

Protein sequence

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MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRR
TPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL

Carg24652 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome