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Carg24669 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24669
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB-box zinc finger protein 20-like isoform X1
Genome locationCarg_Chr11:5783682..5785571
RNA-Seq ExpressionCarg24669
SyntenyCarg24669
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588424.1 B-box zinc finger protein 20, partial [Cucurbita argyrosperma subsp. sororia]8.1e-53100Show/hide
Query:  FNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADLHILPYSHSLD
        FNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADLHILPYSHSLD
Subjt:  FNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADLHILPYSHSLD

Query:  CHFIC
        CHFIC
Subjt:  CHFIC

KAG7022270.1 hypothetical protein SDJN02_16001, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-69100Show/hide
Query:  NGEEPIILWLHLRVKSTLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKI
        NGEEPIILWLHLRVKSTLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKI
Subjt:  NGEEPIILWLHLRVKSTLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKI

Query:  KKQTETNFLFVAADLHILPYSHSLDCHFIC
        KKQTETNFLFVAADLHILPYSHSLDCHFIC
Subjt:  KKQTETNFLFVAADLHILPYSHSLDCHFIC

XP_022926713.1 B-box zinc finger protein 20-like isoform X1 [Cucurbita moschata]7.6e-5190.43Show/hide
Query:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL
        ST    +  +FNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRG KMAVADKIISNF SENNSGKIKKQTETNFLFVAADL
Subjt:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL

Query:  HILPYSHSLDCHFIC
        H+LPYSHSLDCHFIC
Subjt:  HILPYSHSLDCHFIC

XP_022971167.1 LOW QUALITY PROTEIN: B-box zinc finger protein 20-like [Cucurbita maxima]3.1e-4482.76Show/hide
Query:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL
        ST    +  +FNGEILA GNQNLERQQESLGIERFGNTLEFVGKFSQTG WNGVGISMKT R  KMAV DKII++FG+ENNSGKIK+QTETNFLFV ADL
Subjt:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL

Query:  HILPY-SHSLDCHFIC
        HILPY SHSLDCHFIC
Subjt:  HILPY-SHSLDCHFIC

XP_023531436.1 B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo]7.6e-5190.43Show/hide
Query:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL
        ST    +  +FNGEILA GNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRG KMAVADKIISNFGSENNSGKIKKQTETNFLFVAA+L
Subjt:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL

Query:  HILPYSHSLDCHFIC
        HILPYSHSLDCHFIC
Subjt:  HILPYSHSLDCHFIC

TrEMBL top hitse value%identityAlignment
A0A6J1C1T9 B-box zinc finger protein 20 isoform X19.2e-1866.23Show/hide
Query:  EFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIK
        +FN EI+A  NQNLE Q ESLG  RFGNTLEF GK SQT  WNGVGIS KTCR  KM V D+IIS+FGSE+ +  +K
Subjt:  EFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIK

A0A6J1EIZ3 B-box zinc finger protein 20-like isoform X13.7e-5190.43Show/hide
Query:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL
        ST    +  +FNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRG KMAVADKIISNF SENNSGKIKKQTETNFLFVAADL
Subjt:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL

Query:  HILPYSHSLDCHFIC
        H+LPYSHSLDCHFIC
Subjt:  HILPYSHSLDCHFIC

A0A6J1I179 LOW QUALITY PROTEIN: B-box zinc finger protein 20-like1.5e-4482.76Show/hide
Query:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL
        ST    +  +FNGEILA GNQNLERQQESLGIERFGNTLEFVGKFSQTG WNGVGISMKT R  KMAV DKII++FG+ENNSGKIK+QTETNFLFV ADL
Subjt:  STLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLFVAADL

Query:  HILPY-SHSLDCHFIC
        HILPY SHSLDCHFIC
Subjt:  HILPY-SHSLDCHFIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGGCGAAGAGCCCATAATACTTTGGCTCCATCTTCGCGTTAAATCCACCTTGTGGAAAAGGCAACGCTCAGAGTTTAACGGCGAAATTCTGGCAACTGGGAACCAAAA
TCTGGAGAGGCAACAGGAATCACTAGGCATCGAAAGATTTGGCAACACCTTGGAATTTGTAGGTAAATTTTCTCAAACTGGATTTTGGAATGGAGTTGGAATCTCCATGA
AAACTTGTAGAGGTGGAAAAATGGCGGTGGCTGATAAGATCATCAGCAACTTCGGCTCTGAAAACAATTCTGGTAAAATCAAAAAACAAACAGAAACCAACTTTTTGTTT
GTTGCTGCTGATTTGCATATTTTACCTTACTCCCACTCTTTAGATTGCCATTTCATTTGCTGA
mRNA sequenceShow/hide mRNA sequence
AATGGCGAAGAGCCCATAATACTTTGGCTCCATCTTCGCGTTAAATCCACCTTGTGGAAAAGGCAACGCTCAGAGTTTAACGGCGAAATTCTGGCAACTGGGAACCAAAA
TCTGGAGAGGCAACAGGAATCACTAGGCATCGAAAGATTTGGCAACACCTTGGAATTTGTAGGTAAATTTTCTCAAACTGGATTTTGGAATGGAGTTGGAATCTCCATGA
AAACTTGTAGAGGTGGAAAAATGGCGGTGGCTGATAAGATCATCAGCAACTTCGGCTCTGAAAACAATTCTGGTAAAATCAAAAAACAAACAGAAACCAACTTTTTGTTT
GTTGCTGCTGATTTGCATATTTTACCTTACTCCCACTCTTTAGATTGCCATTTCATTTGCTGAATTTAAAGTGATTAATGATTTTATGATGAGAATGGAATCAAAATGTC
TTTGGTTGTTTGGTTTGATTTGGCAACTAAAGCGACTCCATGTGTTTGGGAACATTCTCCTGTACTAAAATTAGCATCAAACACTTTTCTCACTCTCTTTTACCCATTTC
ATAAAACAATAGTTCAAATATAATTTTTCTTTTAGCTGGGTAAGTTTAGCACAGCTATGCTCACTTTTGACATTTAATGTTATTTACTTGTTCAATTTTGATACTAAAAT
TCTTTTAACAAATTTGAATTTGACTGTAAAACAATTTTAAAAAATCAAATTCTCCGCAATGGTATAGTATTGTACTCTTTGAGCATAAGTTCTCATGACTTTGCTTTTAA
GCTTCTTCAAAATGTCTCACTCCAATGGAGATAGTATTCTTTGCT
Protein sequenceShow/hide protein sequence
NGEEPIILWLHLRVKSTLWKRQRSEFNGEILATGNQNLERQQESLGIERFGNTLEFVGKFSQTGFWNGVGISMKTCRGGKMAVADKIISNFGSENNSGKIKKQTETNFLF
VAADLHILPYSHSLDCHFIC