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Carg24705 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24705
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiongamma aminobutyrate transaminase 2-like
Genome locationCarg_Chr01:10611320..10613463
RNA-Seq ExpressionCarg24705
SyntenyCarg24705
Gene Ontology termsGO:0009102 - biotin biosynthetic process (biological process)
GO:0009448 - gamma-aminobutyric acid metabolic process (biological process)
GO:0003867 - 4-aminobutyrate transaminase activity (molecular function)
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608001.1 Gamma aminobutyrate transaminase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2598.39Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIKPKVGSC KDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

KAG7037517.1 hypothetical protein SDJN02_01144 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-25100Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

XP_022136651.1 gamma aminobutyrate transaminase 3, chloroplastic-like [Momordica charantia]5.3e-1877.42Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLR+IIKPK+GSC KD +A R SCERLIQVQ LS PYGTEAS QR+NS+T SRNG+G
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

XP_022940077.1 gamma aminobutyrate transaminase 3, chloroplastic-like [Cucurbita moschata]1.4e-2395.16Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIKPKVGSC KDASA R SCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

XP_023523695.1 gamma aminobutyrate transaminase 3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]3.2e-2395.16Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIKPKVGS  KDASALR SCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

TrEMBL top hitse value%identityAlignment
A0A0A0KZU3 Uncharacterized protein2.3e-1167.74Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQR-DNSSTGSRNGQ
        MGFN LLR I  PK+GSC KD +ALR S ERLIQVQ LS  Y TEASLQR DNS+T + +GQ
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQR-DNSSTGSRNGQ

A0A6J1C439 gamma aminobutyrate transaminase 3, chloroplastic-like2.6e-1877.42Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLR+IIKPK+GSC KD +A R SCERLIQVQ LS PYGTEAS QR+NS+T SRNG+G
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

A0A6J1F7R7 gamma aminobutyrate transaminase 2-like1.3e-1470.97Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIK K+GS  KD +A R S ERL Q+Q L+ PYGTEASL+RDN +T SRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

A0A6J1FIM2 gamma aminobutyrate transaminase 3, chloroplastic-like7.0e-2495.16Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIKPKVGSC KDASA R SCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

A0A6J1IN43 gamma aminobutyrate transaminase 2-like1.3e-1470.97Show/hide
Query:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG
        MGFNHLLRTIIK K+GS  KD +A R S ERL Q+Q L+ PYGTEASL+RDN +T SRNGQG
Subjt:  MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCAACCATCTGCTTCGTACGATCATCAAACCCAAGGTTGGTTCCTGTGGAAAAGATGCTTCTGCGCTTAGAAAGTCCTGTGAGCGGCTCATTCAGGTTCAATC
ACTTAGCCACCCATATGGAACAGAAGCATCATTGCAGAGGGACAATTCGAGTACTGGTTCAAGGAACGGTCAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
CATAAAACAAACTGTTCTACAAATAGATATGTAATCGGCCGAAAGCATCTTCTTCTTATAGAAGAACTTGCTCACCAACTGCTCTTTCTTTCTTTGCTTGCACAGGAACA
ACATTTTGAGTGCTTCGCCTAGAACAAGAAATGGGGTTCAACCATCTGCTTCGTACGATCATCAAACCCAAGGTTGGTTCCTGTGGAAAAGATGCTTCTGCGCTTAGAAA
GTCCTGTGAGCGGCTCATTCAGGTTCAATCACTTAGCCACCCATATGGAACAGAAGCATCATTGCAGAGGGACAATTCGAGTACTGGTTCAAGGAACGGTCAAGGGTAAC
TTCGAGTCTCCGTGATAATATTATATATGATCAAGAAAATATTCATCTACTCGAAACATTTTCGATT
Protein sequenceShow/hide protein sequence
MGFNHLLRTIIKPKVGSCGKDASALRKSCERLIQVQSLSHPYGTEASLQRDNSSTGSRNGQG