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Carg24717 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24717
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTubby-like F-box protein
Genome locationCarg_Chr01:10492615..10493229
RNA-Seq ExpressionCarg24717
SyntenyCarg24717
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607987.1 hypothetical protein SDJN03_01329, partial [Cucurbita argyrosperma subsp. sororia]2.3e-102100Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAAER
        VECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAAER
Subjt:  VECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAAER

KAG7037505.1 hypothetical protein SDJN02_01132, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-108100Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

Query:  AAER
        AAER
Subjt:  AAER

XP_022940745.1 uncharacterized protein LOC111446248 [Cucurbita moschata]2.9e-10599Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        ASTAGVRLLIVECKPSDP EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAA
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

Query:  A
        A
Subjt:  A

XP_022981712.1 uncharacterized protein LOC111480776 [Cucurbita maxima]3.2e-10498.51Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        ASTAGVRLLIVECKPSD  EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

Query:  A
        A
Subjt:  A

XP_023523437.1 uncharacterized protein LOC111787650 [Cucurbita pepo subsp. pepo]3.0e-10296.52Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MT +IEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        AS AGVRLLIVECKPSDP EWRRRLESRGADDR NWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSNGGS TAPSAA
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0L485 Uncharacterized protein1.3e-9084.92Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        M EEIE+R +M+IAMKGHPGTGKSTLAQ +ASLLK PLIDKDDVKDCAA LAAA+TA+LVNDLSYDVV+RLASTQLRLGLSV+VDTPLS RSH C L DV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSA
        AS +G R+LIVEC+PSD TEWRRRLESRG DD+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP A
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSA

A0A5A7SP11 Uncharacterized protein4.5e-8887.37Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        M+IAMKGHPGTGKSTLAQ +ASLLKIPLIDKDDVKDCAA LAAA+TA LVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH C L DVAS +G R+LI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        VEC+PSD T WRRRLESRG DDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP  A
Subjt:  VECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

A0A6J1C0A8 uncharacterized protein LOC1110072988.5e-8784.1Show/hide
Query:  EIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVAST
        EIE++TKM+IAMKGHPGTGKST+AQ+LASLLKIPLIDKDDVKDCAAA++AA +AAL+NDLSYDVV+RLASTQLRLGLSV++DTPLSRRSH   L D+AS+
Subjt:  EIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVAST

Query:  AGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPS
        AG RLLIVEC+PSD  EWRRRLESRGA DRTNWHKPSTWREIEMLLE YGGCTEFDVGDVPRLVVDTTAPVSFDE VSTVIDFI SN  SF  PS
Subjt:  AGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPS

A0A6J1FRG5 uncharacterized protein LOC1114462481.4e-10599Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        ASTAGVRLLIVECKPSDP EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAA
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

Query:  A
        A
Subjt:  A

A0A6J1IUR8 uncharacterized protein LOC1114807761.5e-10498.51Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        ASTAGVRLLIVECKPSD  EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
Subjt:  ASTAGVRLLIVECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

Query:  A
        A
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCC
CCTAATCGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGA
CGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGCCGATCTCACTTTTGCCATCTAACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATC
GTCGAGTGTAAGCCATCTGATCCGACGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGAT
GCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGATACTACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGA
TCGATTTCATTGTATCTAACGGTGGTTCTTTCACTGCTCCGTCGGCGGCGGCGGCGGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCC
CCTAATCGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGA
CGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGCCGATCTCACTTTTGCCATCTAACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATC
GTCGAGTGTAAGCCATCTGATCCGACGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGAT
GCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGATACTACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGA
TCGATTTCATTGTATCTAACGGTGGTTCTTTCACTGCTCCGTCGGCGGCGGCGGCGGAGAGATGA
Protein sequenceShow/hide protein sequence
MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
VECKPSDPTEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAAER