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Carg24733 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24733
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionsufE-like protein 1, chloroplastic/mitochondrial
Genome locationCarg_Chr09:5795828..5796944
RNA-Seq ExpressionCarg24733
SyntenyCarg24733
Gene Ontology termsNA
InterPro domainsIPR002634 - BolA protein
IPR036065 - BolA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024994.1 hypothetical protein SDJN02_13814, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-35100Show/hide
Query:  MTTVTKKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRRVRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
        MTTVTKKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRRVRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
Subjt:  MTTVTKKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRRVRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

TYJ98710.1 sufE-like protein 1 [Cucumis melo var. makuwa]1.8e-1143.15Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT  SVEK + ESNTEKSV DSK  DKGN+                                                 
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------

Query:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                      V+RHRL+ NLLQ++ QS L  L+ISAKTPDEL
Subjt:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

XP_004139770.1 sufE-like protein 1, chloroplastic/mitochondrial [Cucumis sativus]2.8e-1243.84Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT DS EKVK ESNTEKSV DSK  DKG++                                                 
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------

Query:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                      V+RHRLV NLLQ++ QS L  L+ISAKTPDE+
Subjt:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

XP_008447788.1 PREDICTED: LOW QUALITY PROTEIN: sufE-like protein 1, chloroplastic/mitochondrial [Cucumis melo]1.8e-1143.15Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT  SVEK + ESNTEKSV DSK  DKGN+                                                 
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------

Query:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                      V+RHRL+ NLLQ++ QS L  L+ISAKTPDEL
Subjt:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

XP_038897655.1 sufE-like protein 1, chloroplastic/mitochondrial [Benincasa hispida]8.7e-1445.21Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDK----------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT DSVEKV++ESNTEKSVEDSK EDK                                                    
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDK----------------------------------------------------

Query:  ----------GNRRVRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                  G   V+RHRL+ NLLQ++ QS L  L+ISAKTPDEL
Subjt:  ----------GNRRVRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

TrEMBL top hitse value%identityAlignment
A0A0A0K8K1 SufE domain-containing protein1.4e-1243.84Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT DS EKVK ESNTEKSV DSK  DKG++                                                 
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------

Query:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                      V+RHRLV NLLQ++ QS L  L+ISAKTPDE+
Subjt:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

A0A1S3BJ54 LOW QUALITY PROTEIN: sufE-like protein 1, chloroplastic/mitochondrial8.8e-1243.15Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT  SVEK + ESNTEKSV DSK  DKGN+                                                 
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------

Query:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                      V+RHRL+ NLLQ++ QS L  L+ISAKTPDEL
Subjt:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

A0A5D3BG00 SufE-like protein 18.8e-1243.15Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------
        KKAL LLVESEKGNGSAVSSSQT  SVEK + ESNTEKSV DSK  DKGN+                                                 
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRR------------------------------------------------

Query:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                      V+RHRL+ NLLQ++ QS L  L+ISAKTPDEL
Subjt:  --------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

A0A6J1FMC1 sufE-like protein 1, chloroplastic/mitochondrial5.3e-0939.86Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNT--EKSVEDSKSEDKGNRR----------------------------------------------
        +KALGLLVESEKGNGSA+SSSQ  D+VEKV+S+S T  EK  E+SK  DKG+                                                
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNT--EKSVEDSKSEDKGNRR----------------------------------------------

Query:  ----------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                        V+RHRL+ NLLQE+ QS L  L+ISAKTPDEL
Subjt:  ----------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

A0A6J1J2B6 sufE-like protein 1, chloroplastic/mitochondrial1.2e-0839.86Show/hide
Query:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNT--EKSVEDSKSEDKGNRR----------------------------------------------
        +KALGLLVESEKGN SA+SSSQ  D+VEKVKS+S T  EK  E+SK  DKG+                                                
Subjt:  KKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNT--EKSVEDSKSEDKGNRR----------------------------------------------

Query:  ----------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL
                        V+RHRL+ NLLQE+ QS L  L+ISAKTPDEL
Subjt:  ----------------VRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCGTGACGAAGAAGGCGCTTGGGTTGCTTGTGGAATCCGAAAAAGGCAATGGCAGTGCGGTTTCATCGTCACAAACAGTTGATTCTGTCGAGAAAGTAAAATC
AGAATCTAATACTGAGAAATCCGTTGAAGACTCGAAGTCGGAAGATAAAGGAAATCGCAGAGTTAGAAGGCATAGGCTCGTTGATAATCTGTTGCAAGAAGATTTCCAGA
GTGTACTGGACGTCCTAGCCATTTCAGCAAAGACACCTGATGAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGACCGTGACGAAGAAGGCGCTTGGGTTGCTTGTGGAATCCGAAAAAGGCAATGGCAGTGCGGTTTCATCGTCACAAACAGTTGATTCTGTCGAGAAAGTAAAATC
AGAATCTAATACTGAGAAATCCGTTGAAGACTCGAAGTCGGAAGATAAAGGAAATCGCAGAGTTAGAAGGCATAGGCTCGTTGATAATCTGTTGCAAGAAGATTTCCAGA
GTGTACTGGACGTCCTAGCCATTTCAGCAAAGACACCTGATGAACTCTGA
Protein sequenceShow/hide protein sequence
MTTVTKKALGLLVESEKGNGSAVSSSQTVDSVEKVKSESNTEKSVEDSKSEDKGNRRVRRHRLVDNLLQEDFQSVLDVLAISAKTPDEL