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Carg24781 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24781
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 32
Genome locationCarg_Chr14:11512754..11513089
RNA-Seq ExpressionCarg24781
SyntenyCarg24781
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582127.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5699.1Show/hide
Query:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
        MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYT+SGSCAPPPANPYNRG
Subjt:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

KAG7018527.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-57100Show/hide
Query:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
        MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
Subjt:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

XP_022956250.1 protein RALF-like 32 [Cucurbita moschata]8.8e-5697.3Show/hide
Query:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
        MTTRI KSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGE+ETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYT+SGSCAPPPANPYNRG
Subjt:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]1.8e-5699.1Show/hide
Query:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
        MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFL QQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
Subjt:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]1.8e-4586.11Show/hide
Query:  KSCFL---LFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSK
        +SCFL   LFLLL+QDLCLVRA SKHSCNGSIAECG EEE LMESEISRRFL Q KKYISIGALKKDHPACDG GGGQPYT+SGSC PPP NPY RGCSK
Subjt:  KSCFL---LFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSK

Query:  IYRCRSDD
        IYRCRSDD
Subjt:  IYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L624 Uncharacterized protein6.4e-2872.45Show/hide
Query:  KSCFLLFL---LLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKK-YISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
        ++CFLL L    L+QDLCLVR SS HSCNGSIAEC  EEE LMESEI+RRFLAQQKK YIS   LKKD PACD G  GQPYT+SGSC P  ANPYN G
Subjt:  KSCFLLFL---LLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKK-YISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG

A0A0A0L9A8 Uncharacterized protein9.8e-4584.4Show/hide
Query:  KSCFL----LFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCS
        ++CFL    LFL L QDLCLVRASS HSCNGSIA C  EEE LMESEI+RRFL QQKKYISIGALKKDHPACDG  GGQPYTRSGSCAPPPANPYNRGCS
Subjt:  KSCFL----LFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCS

Query:  KIYRCRSDD
        KIYRCRSDD
Subjt:  KIYRCRSDD

A0A5A7VKE5 Protein RALF-like 327.5e-4588.12Show/hide
Query:  LLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD
        LLFL L+QDLCLVRASS HSCNGSIAECG E+E LMESEISRRFLAQQKKYISIGALKKDHPACDG  GG+PYT+SGSCAPPPANPY+RGC KIYRCRSD
Subjt:  LLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD

Query:  D
        D
Subjt:  D

A0A6J1C9Y4 protein RALF-like 326.2e-3977.36Show/hide
Query:  SKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIY
        S+  FLL L L+Q LCL+RAS    CNGSIAEC  E+E LMESEISRRFL QQKKYISIGALKKD PACDG G GQPYT+SGSC PPP+NPY+RGCSKIY
Subjt:  SKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIY

Query:  RCRSDD
        RCRSDD
Subjt:  RCRSDD

A0A6J1GXB3 protein RALF-like 324.2e-5697.3Show/hide
Query:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG
        MTTRI KSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGE+ETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYT+SGSCAPPPANPYNRG
Subjt:  MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG

Query:  CSKIYRCRSDD
        CSKIYRCRSDD
Subjt:  CSKIYRCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 328.9e-1946.02Show/hide
Query:  TRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPY
        +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R   +Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY
Subjt:  TRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPY

Query:  NRGCSKIYRCRSD
        +RGCSK YRC  D
Subjt:  NRGCSKIYRCRSD

Q8L9P8 Protein RALF-like 331.2e-1050.62Show/hide
Query:  CNGSIAECG---GEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR
        CNG+IAEC     EEE  M+SEI+RR LA   KYIS GAL+++   C   G      R G+     ANPY+RGCS I RCR
Subjt:  CNGSIAECG---GEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR

Q945T0 Rapid alkalinization factor1.2e-1048.84Show/hide
Query:  ASSKHSCNGSIAECGGEEETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRS
        A S   C GSI EC  EEE   ++SE +RR LA  KKYIS GAL+K+   C   G      + G+     ANPY+RGCS I RCRS
Subjt:  ASSKHSCNGSIAECGGEEETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRS

Q9MA62 Protein RALF-like 222.3e-1148.39Show/hide
Query:  LCLVRASSK---HSCNGSIAECGGEEETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR
        L  VRA S      C GSIAEC  EEE +  +S+ISRR LA QKKYIS GA++++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  LCLVRASSK---HSCNGSIAECGGEEETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR

Q9SRY3 Protein RALF-like 18.1e-1251.9Show/hide
Query:  CNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRS
        C+GSIAEC G EE  M+SEI+RR LA   KYIS  +LK++   C   G      ++G+     ANPY+RGCSKI RCRS
Subjt:  CNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 15.7e-1351.9Show/hide
Query:  CNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRS
        C+GSIAEC G EE  M+SEI+RR LA   KYIS  +LK++   C   G      ++G+     ANPY+RGCSKI RCRS
Subjt:  CNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRS

AT3G05490.1 ralf-like 221.7e-1248.39Show/hide
Query:  LCLVRASSK---HSCNGSIAECGGEEETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR
        L  VRA S      C GSIAEC  EEE +  +S+ISRR LA QKKYIS GA++++   C   G      + G+     ANPY+RGCS I RCR
Subjt:  LCLVRASSK---HSCNGSIAECGGEEETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR

AT3G16570.1 rapid alkalinization factor 231.7e-0943.16Show/hide
Query:  CNGSIAEC---------------GGE--EETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR
        C G+IAEC               GGE  EE  M+SEI+RR LA  ++YIS GAL+++   C   G      R G+     ANPY+RGCS I RCR
Subjt:  CNGSIAEC---------------GGE--EETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR

AT4G14010.1 ralf-like 326.3e-2046.02Show/hide
Query:  TRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPY
        +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R   +Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY
Subjt:  TRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEET-----LMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPY

Query:  NRGCSKIYRCRSD
        +RGCSK YRC  D
Subjt:  NRGCSKIYRCRSD

AT4G15800.1 ralf-like 338.3e-1250.62Show/hide
Query:  CNGSIAECG---GEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR
        CNG+IAEC     EEE  M+SEI+RR LA   KYIS GAL+++   C   G      R G+     ANPY+RGCS I RCR
Subjt:  CNGSIAECG---GEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAAGAATCTCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCGATAGCTGA
GTGTGGTGGTGAAGAAGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAGAAGGATCACCCGGCTT
GTGATGGCGGTGGTGGTGGTCAACCTTACACTAGAAGTGGAAGCTGCGCTCCGCCGCCAGCTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGAC
GATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAAGAATCTCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCGATAGCTGA
GTGTGGTGGTGAAGAAGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAGAAGGATCACCCGGCTT
GTGATGGCGGTGGTGGTGGTCAACCTTACACTAGAAGTGGAAGCTGCGCTCCGCCGCCAGCTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGAC
GATTGA
Protein sequenceShow/hide protein sequence
MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD
D