; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24782 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24782
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 32
Genome locationCarg_Chr14:11437218..11437556
RNA-Seq ExpressionCarg24782
SyntenyCarg24782
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD24133.1 TPA_asm: hypothetical protein HUJ06_025596 [Nelumbo nucifera]4.2e-1344.83Show/hide
Query:  MEGSSSHSSLNLVLGLLYL--LIFTNVVVVVAVDS--LISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPRE
        M  SS+ SSL  +L  L L  L+++  V V A +S      CNGSIAEC +E E LMESEISRRFL +   + Y  L  N+  C   +G  Y G C P  
Subjt:  MEGSSSHSSLNLVLGLLYL--LIFTNVVVVVAVDS--LISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPRE

Query:  ANPYDRECSGTYNRCK
        +NP +R CS  Y RC+
Subjt:  ANPYDRECSGTYNRCK

KAG6582109.1 Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-56100Show/hide
Query:  MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPY
        MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPY
Subjt:  MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPY

Query:  DRECSGTYNRCK
        DRECSGTYNRCK
Subjt:  DRECSGTYNRCK

XP_010247297.1 PREDICTED: protein RALF-like 32 [Nelumbo nucifera]4.2e-1344.83Show/hide
Query:  MEGSSSHSSLNLVLGLLYL--LIFTNVVVVVAVDS--LISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPRE
        M  SS+ SSL  +L  L L  L+++  V V A +S      CNGSIAEC +E E LMESEISRRFL +   + Y  L  N+  C   +G  Y G C P  
Subjt:  MEGSSSHSSLNLVLGLLYL--LIFTNVVVVVAVDS--LISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPRE

Query:  ANPYDRECSGTYNRCK
        +NP +R CS  Y RC+
Subjt:  ANPYDRECSGTYNRCK

XP_022138044.1 protein RALF-like 32 [Momordica charantia]2.9e-1451.92Show/hide
Query:  LVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTY
        L+L LL L  F NV  V+   + ++PCNGSIAECY E E LMESEISRRFL + K  ++Y+ L K++  C  G+GKPY     C P  +NPYDR C   Y
Subjt:  LVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTY

Query:  NRCK
         RCK
Subjt:  NRCK

XP_022138261.1 protein RALF-like 32 [Momordica charantia]4.9e-1452.58Show/hide
Query:  LLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTYNRCK
        LL F N V +V   S ++PCNGSI+ECY E ETL ESEISRRFL + K  ++Y+   K++  C  G+GKPY     C P  +NPYDR CS  Y RCK
Subjt:  LLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTYNRCK

TrEMBL top hitse value%identityAlignment
A0A1U7ZHZ9 protein RALF-like 322.0e-1344.83Show/hide
Query:  MEGSSSHSSLNLVLGLLYL--LIFTNVVVVVAVDS--LISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPRE
        M  SS+ SSL  +L  L L  L+++  V V A +S      CNGSIAEC +E E LMESEISRRFL +   + Y  L  N+  C   +G  Y G C P  
Subjt:  MEGSSSHSSLNLVLGLLYL--LIFTNVVVVVAVDS--LISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPRE

Query:  ANPYDRECSGTYNRCK
        +NP +R CS  Y RC+
Subjt:  ANPYDRECSGTYNRCK

A0A4S4E196 Uncharacterized protein2.7e-1045Show/hide
Query:  LGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGR-GKPYRGKCQPREANPYDRECSGTYNRCK
        L LL LL     V V   D+ +  CNGSIAEC+ ++E LMESE+SRRFL     +TY  L +++  C +G+ G+ Y   C P+E+NP  R CS  Y RC+
Subjt:  LGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGR-GKPYRGKCQPREANPYDRECSGTYNRCK

A0A6J1C8Z5 protein RALF-like 321.4e-1451.92Show/hide
Query:  LVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTY
        L+L LL L  F NV  V+   + ++PCNGSIAECY E E LMESEISRRFL + K  ++Y+ L K++  C  G+GKPY     C P  +NPYDR C   Y
Subjt:  LVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTY

Query:  NRCK
         RCK
Subjt:  NRCK

A0A6J1C986 protein RALF-like 322.4e-1452.58Show/hide
Query:  LLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTYNRCK
        LL F N V +V   S ++PCNGSI+ECY E ETL ESEISRRFL + K  ++Y+   K++  C  G+GKPY     C P  +NPYDR CS  Y RCK
Subjt:  LLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPY--RGKCQPREANPYDRECSGTYNRCK

A0A6J1C9Y4 protein RALF-like 321.1e-1150Show/hide
Query:  LLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPC-ANGRGKPY--RGKCQPREANPYDRECSGTYNRCK
        LL+F    + +   S  SPCNGSIAEC  E E LMESEISRRFL + K  ++   L K++  C  +GRG+PY   G C P  +NPYDR CS  Y RC+
Subjt:  LLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPC-ANGRGKPY--RGKCQPREANPYDRECSGTYNRCK

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 339.3e-0843.75Show/hide
Query:  SPCNGSIAEC---YKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK
        S CNG+IAEC     E E  M+SEI+RR L   K ++Y  L +N  PC+  RG  Y    +  +ANPY R CS    RC+
Subjt:  SPCNGSIAEC---YKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK

Q9LUS7 Rapid alkalinization factor 233.7e-0429.71Show/hide
Query:  MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDS---------LISPCNGSIAECYKEV-----------------ETLMESEISRRFLGRPKDLTYEFLD
        M G S +S    +  +L +L   N  V V+  S           + C G+IAEC                     E  M+SEI+RR L   + ++Y  L 
Subjt:  MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDS---------LISPCNGSIAECYKEV-----------------ETLMESEISRRFLGRPKDLTYEFLD

Query:  KNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK
        +N  PC+  RG  Y    +  +ANPY R CS    RC+
Subjt:  KNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK

Q9MA62 Protein RALF-like 222.9e-0944.44Show/hide
Query:  SLISPCNGSIAECYKEVETL-MESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK
        SL S C GSIAEC  E E +  +S+ISRR L + K ++Y  + +N  PC+  RG  Y    +  +ANPY R CS T  RC+
Subjt:  SLISPCNGSIAECYKEVETL-MESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK

Q9SRY3 Protein RALF-like 18.4e-0945.71Show/hide
Query:  SPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECS
        S C+GSIAEC    E  M+SEI+RR L   K ++Y+ L +N  PC+  RG  Y       +ANPY R CS
Subjt:  SPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 16.0e-1045.71Show/hide
Query:  SPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECS
        S C+GSIAEC    E  M+SEI+RR L   K ++Y+ L +N  PC+  RG  Y       +ANPY R CS
Subjt:  SPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECS

AT1G28270.1 ralf-like 49.9e-0536.27Show/hide
Query:  LGLLYLLIFTNVVVVVAVDS------LISPC---NGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRE
        +G+  LLIF  +++ +   S      L   C    G I E   E+E+LM+SE +RR L R +  + Y+ L KN  PC+  RG+ Y    + R  NPY R 
Subjt:  LGLLYLLIFTNVVVVVAVDS------LISPC---NGSIAECYKEVETLMESEISRRFLGRPKD-LTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRE

Query:  CS
        CS
Subjt:  CS

AT3G05490.1 ralf-like 222.1e-1044.44Show/hide
Query:  SLISPCNGSIAECYKEVETL-MESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK
        SL S C GSIAEC  E E +  +S+ISRR L + K ++Y  + +N  PC+  RG  Y    +  +ANPY R CS T  RC+
Subjt:  SLISPCNGSIAECYKEVETL-MESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK

AT3G16570.1 rapid alkalinization factor 232.6e-0529.71Show/hide
Query:  MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDS---------LISPCNGSIAECYKEV-----------------ETLMESEISRRFLGRPKDLTYEFLD
        M G S +S    +  +L +L   N  V V+  S           + C G+IAEC                     E  M+SEI+RR L   + ++Y  L 
Subjt:  MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDS---------LISPCNGSIAECYKEV-----------------ETLMESEISRRFLGRPKDLTYEFLD

Query:  KNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK
        +N  PC+  RG  Y    +  +ANPY R CS    RC+
Subjt:  KNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK

AT4G15800.1 ralf-like 336.6e-0943.75Show/hide
Query:  SPCNGSIAEC---YKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK
        S CNG+IAEC     E E  M+SEI+RR L   K ++Y  L +N  PC+  RG  Y    +  +ANPY R CS    RC+
Subjt:  SPCNGSIAEC---YKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNRCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAGCTCAAGCCATTCAAGCCTCAACCTCGTCCTCGGCCTTCTATATCTATTGATTTTTACTAACGTCGTCGTTGTCGTCGCAGTCGATAGCTTGATAAGCCC
ATGCAATGGTTCGATAGCGGAGTGCTATAAAGAAGTTGAGACGTTGATGGAGTCAGAGATAAGTCGGAGGTTTCTCGGACGACCTAAGGATTTAACCTATGAATTTTTGG
ATAAAAACAAAGCACCTTGTGCTAATGGTAGAGGTAAACCTTACCGTGGAAAGTGTCAGCCTCGTGAAGCTAATCCTTATGACAGAGAATGCAGCGGAACGTATAATCGA
TGTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAAGCTCAAGCCATTCAAGCCTCAACCTCGTCCTCGGCCTTCTATATCTATTGATTTTTACTAACGTCGTCGTTGTCGTCGCAGTCGATAGCTTGATAAGCCC
ATGCAATGGTTCGATAGCGGAGTGCTATAAAGAAGTTGAGACGTTGATGGAGTCAGAGATAAGTCGGAGGTTTCTCGGACGACCTAAGGATTTAACCTATGAATTTTTGG
ATAAAAACAAAGCACCTTGTGCTAATGGTAGAGGTAAACCTTACCGTGGAAAGTGTCAGCCTCGTGAAGCTAATCCTTATGACAGAGAATGCAGCGGAACGTATAATCGA
TGTAAATAG
Protein sequenceShow/hide protein sequence
MEGSSSHSSLNLVLGLLYLLIFTNVVVVVAVDSLISPCNGSIAECYKEVETLMESEISRRFLGRPKDLTYEFLDKNKAPCANGRGKPYRGKCQPREANPYDRECSGTYNR
CK