; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24830 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24830
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr16:6389308..6389676
RNA-Seq ExpressionCarg24830
SyntenyCarg24830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577444.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]8.7e-65100Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDFPNFN
        ELMDASRYCFQQSLRPDFPNFN
Subjt:  ELMDASRYCFQQSLRPDFPNFN

XP_004152909.1 calcium-binding protein KRP1 [Cucumis sativus]3.2e-5186.44Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SD+ELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDF
        ELM+ASRYCF +SLR +F
Subjt:  ELMDASRYCFQQSLRPDF

XP_022932158.1 calcium-binding protein PBP1-like [Cucurbita moschata]8.7e-65100Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDFPNFN
        ELMDASRYCFQQSLRPDFPNFN
Subjt:  ELMDASRYCFQQSLRPDFPNFN

XP_022985284.1 calcium-binding protein PBP1-like [Cucurbita maxima]4.0e-6296.72Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGD SDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDFPNFN
        ELMDASRYCFQQSLR +FPNF+
Subjt:  ELMDASRYCFQQSLRPDFPNFN

XP_023520447.1 calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]1.8e-6296.72Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGD SDEELR MLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDFPNFN
        ELMDASR+CFQQSLRPDFPNF+
Subjt:  ELMDASRYCFQQSLRPDFPNFN

TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein1.6e-5186.44Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SD+ELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDF
        ELM+ASRYCF +SLR +F
Subjt:  ELMDASRYCFQQSLRPDF

A0A1S3CKV7 calcium-binding protein PBP1-like3.5e-5185.59Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M  NN IPQSESGF+DWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SD+ELRGMLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDF
        ELM+ASRYCF +SLR +F
Subjt:  ELMDASRYCFQQSLRPDF

A0A5A7SII1 Calcium-binding protein PBP1-like3.5e-5185.59Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M  NN IPQSESGF+DWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SD+ELRGMLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDF
        ELM+ASRYCF +SLR +F
Subjt:  ELMDASRYCFQQSLRPDF

A0A6J1F0V4 calcium-binding protein PBP1-like4.2e-65100Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDFPNFN
        ELMDASRYCFQQSLRPDFPNFN
Subjt:  ELMDASRYCFQQSLRPDFPNFN

A0A6J1JCW0 calcium-binding protein PBP1-like2.0e-6296.72Show/hide
Query:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGD SDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  ELMDASRYCFQQSLRPDFPNFN
        ELMDASRYCFQQSLR +FPNF+
Subjt:  ELMDASRYCFQQSLRPDFPNFN

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP11.2e-3568.81Show/hide
Query:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYC
        +  F D+LP MA  LGGEGLIGELCNGF LLMD EKGVI  ESL+RNAAA LGLGD +DE++R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ASR  
Subjt:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYC

Query:  FQQSLRPDF
          + +  +F
Subjt:  FQQSLRPDF

P43646 Caltractin (Fragment)1.2e-0840.7Show/hide
Query:  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS
        FE++L  M  K+G      E+   F L  D E G I+ ++LKR A  LG  + +DEEL+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS

Q06827 Caltractin1.2e-0840.7Show/hide
Query:  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS
        FE++L  M  K+G      E+   F L  D E G I+ ++LKR A  LG  + +DEEL+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP11.1e-3363.48Show/hide
Query:  NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAA-ALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM
        NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD +KGVI  ESL+RNA+  LGLGD +D+++R M+ EGDFD DGALNQMEFCVLMFRLSPELM
Subjt:  NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAA-ALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM

Query:  DASRYCFQQSLRPDF
        +ASR    + +  +F
Subjt:  DASRYCFQQSLRPDF

Q9ZPX9 Calcium-binding protein KIC9.8e-2751.79Show/hide
Query:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCF
        E+ +ED LP MA K+  E  + ELC GF+LL DPE+ +I  ESL+RN+  LG+   S E+ +GM+REGD DGDGALNQ EFCVLM RLSPE+M+ +    
Subjt:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCF

Query:  QQSLRPDFPNFN
        +++L  +  N N
Subjt:  QQSLRPDFPNFN

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein6.9e-2851.79Show/hide
Query:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCF
        E+ +ED LP MA K+  E  + ELC GF+LL DPE+ +I  ESL+RN+  LG+   S E+ +GM+REGD DGDGALNQ EFCVLM RLSPE+M+ +    
Subjt:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCF

Query:  QQSLRPDFPNFN
        +++L  +  N N
Subjt:  QQSLRPDFPNFN

AT4G27280.1 Calcium-binding EF-hand family protein8.2e-3768.81Show/hide
Query:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYC
        +  F D+LP MA  LGGEGLIGELCNGF LLMD EKGVI  ESL+RNAAA LGLGD +DE++R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ASR  
Subjt:  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYC

Query:  FQQSLRPDF
          + +  +F
Subjt:  FQQSLRPDF

AT4G37010.1 centrin 22.2e-0529.9Show/hide
Query:  QIPQSESG---FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS
        ++ +++SG   F++++  M  K G    I EL   F ++     G I+   +K  A  LG  + +D ++  M+ E D D DG +N  EF  +M R S
Subjt:  QIPQSESG---FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS

AT4G37010.2 centrin 22.2e-0529.9Show/hide
Query:  QIPQSESG---FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS
        ++ +++SG   F++++  M  K G    I EL   F ++     G I+   +K  A  LG  + +D ++  M+ E D D DG +N  EF  +M R S
Subjt:  QIPQSESG---FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLS

AT5G54490.1 pinoid-binding protein 17.7e-3563.48Show/hide
Query:  NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAA-ALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM
        NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD +KGVI  ESL+RNA+  LGLGD +D+++R M+ EGDFD DGALNQMEFCVLMFRLSPELM
Subjt:  NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAA-ALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM

Query:  DASRYCFQQSLRPDF
        +ASR    + +  +F
Subjt:  DASRYCFQQSLRPDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGG
ATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCA
TGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTC
CAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGG
ATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCA
TGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTC
CAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA
Protein sequenceShow/hide protein sequence
MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCF
QQSLRPDFPNFN