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Carg24833 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24833
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProhibitin
Genome locationCarg_Chr16:6466567..6469575
RNA-Seq ExpressionCarg24833
SyntenyCarg24833
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015519.1 Prohibitin-3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-35100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEESRKELQGTEKKSWLKILLDRVCTERKDDLLIDSSQT
        MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEESRKELQGTEKKSWLKILLDRVCTERKDDLLIDSSQT
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEESRKELQGTEKKSWLKILLDRVCTERKDDLLIDSSQT
RZC69761.1 hypothetical protein C5167_032885 [Papaver somniferum]2.7e-0652.86Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEES---------RKELQGTEKKSWLKILL
        MGLIELRRIEASREIASTLA+SPNV+YLPG  ++  L ++ EE           KE++ T+K+  +K  L
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEES---------RKELQGTEKKSWLKILL
XP_002300084.2 prohibitin-3, mitochondrial [Populus trichocarpa]7.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
XP_014499851.1 prohibitin-3, mitochondrial [Vigna radiata var. radiata]7.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
XP_034906453.1 prohibitin-3, mitochondrial-like [Populus alba]7.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
TrEMBL top hitse value%identityAlignment
A0A1S3U1G2 Prohibitin3.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
A0A4Y7KC83 PHB domain-containing protein1.3e-0652.86Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEES---------RKELQGTEKKSWLKILL
        MGLIELRRIEASREIASTLA+SPNV+YLPG  ++  L ++ EE           KE++ T+K+  +K  L
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEES---------RKELQGTEKKSWLKILL
A0A6J1EVK6 Prohibitin3.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
A0A6J1JCS5 Prohibitin3.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
B9GJB2 Prohibitin3.7e-06100Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLAKSPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
SwissProt top hitse value%identityAlignment
O04331 Prohibitin-3, mitochondrial2.3e-0896.67Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLA+SPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
Q9BKU4 Mitochondrial prohibitin complex protein 19.8e-0463.33Show/hide
Query:  GLIELRRIEASREIASTLAKSPNVAYLPGD
        GL+ELR+IEA+ EIA  +AK+ NV YLPG+
Subjt:  GLIELRRIEASREIASTLAKSPNVAYLPGD
Q9LK25 Prohibitin-4, mitochondrial6.6e-0890Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASRE+A+TLA+SPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
Q9LY99 Prohibitin-5, mitochondrial8.9e-0572.41Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLP
        MGLI+LRR+EA+RE+A TL+ SPNV YLP
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLP
Arabidopsis top hitse value%identityAlignment
AT3G27280.1 prohibitin 44.7e-0990Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASRE+A+TLA+SPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
AT3G27280.2 prohibitin 44.7e-0990Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASRE+A+TLA+SPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG
AT5G14300.1 prohibitin 56.3e-0672.41Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLP
        MGLI+LRR+EA+RE+A TL+ SPNV YLP
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLP
AT5G40770.1 prohibitin 31.6e-0996.67Show/hide
Query:  MGLIELRRIEASREIASTLAKSPNVAYLPG
        MGLIELRRIEASREIASTLA+SPNVAYLPG
Subjt:  MGLIELRRIEASREIASTLAKSPNVAYLPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGATTGCCATGTTCATCAACT
AGCGATATCAGTTGAAGAGTCTAGAAAAGAACTACAGGGAACTGAAAAGAAATCATGGCTTAAGATTCTCCTTGATAGAGTGTGCACAGAACGGAAGGATGATCTGCTGA
TTGACTCGTCTCAAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGATTGCCATGTTCATCAACT
AGCGATATCAGTTGAAGAGTCTAGAAAAGAACTACAGGGAACTGAAAAGAAATCATGGCTTAAGATTCTCCTTGATAGAGTGTGCACAGAACGGAAGGATGATCTGCTGA
TTGACTCGTCTCAAACTTAGAGCTCTACCCCACGGTATGCGTAATGGTAAATGAACATCATAGAATAAGAGTTTTTAGACATTTTCTGTCTCATAAAAATTAGTCCGATG
ATCGAACATATTCTTGATTCAGCAATTGTTTTCATTTAAGTTTTTGCCTTTTTGAGGGACTCCCTCTTCTCTTGTGAGCACGTCTTATTTGAACATAAGGCCCGTTTCTT
TCAGTATAAAGAATGGAGTTTGGTGGTCTTTGTAATTTTGTTTTATTCCTTATTGCATCATAATATAAAGTAAAAATAACGTTAGATATGTTAAAAAAAAAAGTTTATAG
ATAATGGTTAAGATTTAAATCTAGAATCATATTCTTTGAATTGTGCTTCATCAATCATCAGTCAATTTAGAATTGTGTTTGGGCTGTTGAACCTTCTGTTTTACTCAATG
TTTCTATACATCAAATATGCAAATTAATAAAAGATCGTCTAAAGAATAAGTTTGACCGAGAGTTTCATTAAGTAAAAGGAAATAAAAGATCATCCCCCAAGGAAACTCGA
TATTAAAAAGAACTAGAAAGTAATTAAGTTCTTAATTTGGGCTTAAAACAAAAATCGATGCAAGTTGGAACTGGAACTTGAGGCACAATGGAGTAGCACAGGAGGGCAGA
CACAGATAGATA
Protein sequenceShow/hide protein sequence
MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEESRKELQGTEKKSWLKILLDRVCTERKDDLLIDSSQT