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Carg24836 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24836
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF538
Genome locationCarg_Chr16:6514873..6515404
RNA-Seq ExpressionCarg24836
SyntenyCarg24836
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577450.1 hypothetical protein SDJN03_25024, partial [Cucurbita argyrosperma subsp. sororia]8.7e-7399.3Show/hide
Query:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
        MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
Subjt:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW

Query:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPEST
        LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNP+ST
Subjt:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPEST

KAG7015522.1 hypothetical protein SDJN02_23158, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-83100Show/hide
Query:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
        MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
Subjt:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW

Query:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
Subjt:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

XP_022932130.1 uncharacterized protein LOC111438453 [Cucurbita moschata]2.4e-8399.38Show/hide
Query:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
        MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
Subjt:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW

Query:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNP+STELPRHHVRKEKGFEALR
Subjt:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

XP_023546381.1 uncharacterized protein LOC111805505 [Cucurbita pepo subsp. pepo]3.5e-6680.5Show/hide
Query:  AAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL
        A FFY ++  + LCLP SLSLSSTIHDLLRS+GLPAGL+P+EVKSY+LS++GLLEVFLDGPCLTK+ENRVL+ESVV+ANLSYGSLIGVQGLTQEELF+WL
Subjt:  AAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL

Query:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        PVKDIIVDDPKSGLILFDIG+AHKQL+LSLFEDPP+C  +  E  R+ VRKEKGFEALR
Subjt:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

XP_038905336.1 uncharacterized protein LOC120091403 [Benincasa hispida]1.8e-6579.52Show/hide
Query:  MAAFFYYTIY------LILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQ
        MAAFF++TI+      LI L LP SLSLSSTIHDLLRSKGLP GL+P+EVKSYSLS +GLLEVFLDGPCLTK+ENRVL++SVV+ANLSYGSLIGVQGLTQ
Subjt:  MAAFFYYTIY------LILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQ

Query:  EELFVWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        EELF+WLPVKDIIVDDPKSGLILFDIG+AHKQL+LSLFEDPP+C  +     R+HVRKEKGFEALR
Subjt:  EELFVWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

TrEMBL top hitse value%identityAlignment
A0A0A0L572 Uncharacterized protein4.4e-6278.62Show/hide
Query:  AFFYYTIYLILLCLPQSLSLSS-TIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL
        + F + I LI L LP SLSLSS TIHDLLRSKGLP GL+P+EVKSYSLS +GLL+VFLDGPCLTK+ENRV++ESVV ANLSYGSLIGVQGLTQEELF+WL
Subjt:  AFFYYTIYLILLCLPQSLSLSS-TIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL

Query:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        PVKDIIVDDPKSGLILFDIG+AHKQL+LSLFEDPP+C  +S  + R+HVRKEKGFE  R
Subjt:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

A0A6J1CPB7 uncharacterized protein LOC1110128682.0e-6276.25Show/hide
Query:  AAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL
        A FF + + L+ L  P SLSL S+IH+LLRS+GLPAGL+PREVKSY+LS +GLLEVFL+GPCLTK+ENRV++ESVV+ANLSYGSLIGVQGLTQEELF+WL
Subjt:  AAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL

Query:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPE-STELPRHHVRKEKGFEALR
        PVKDIIVDDPKSGLILFDIG+AHKQL+LSLFEDPP+CNP    +L R+ VRKEKGFEA++
Subjt:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPE-STELPRHHVRKEKGFEALR

A0A6J1F1C6 uncharacterized protein LOC1114384531.2e-8399.38Show/hide
Query:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
        MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW
Subjt:  MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVW

Query:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNP+STELPRHHVRKEKGFEALR
Subjt:  LPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

A0A6J1FV48 uncharacterized protein LOC1114475561.2e-6480.25Show/hide
Query:  FFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPV
        FFY ++  + L LP SLSLSSTIHDLLRS+GLPAGL+P+EVKSY+LS++GLLEVFLDGPCLTK+ENRVL+ESVV+ANLSYGSLIGVQGLTQEELF+WLPV
Subjt:  FFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPV

Query:  KDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        KDIIVDDPKSGLILFDIG+AHKQL+LSLFEDPP+C  +  E  R+ VRKEKGFEALR
Subjt:  KDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

A0A6J1JYV3 uncharacterized protein LOC1114891225.5e-6580.25Show/hide
Query:  FFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPV
        FFY ++  + L LP SLSLSSTIHDLLRS+GLPAGL+P+EVKSY+LS++GLLEVFLDGPCLTK+ENRVL+ESVV+ANLSYGSLIGVQGLTQEELF+WLPV
Subjt:  FFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPV

Query:  KDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
        KDIIVDDPKSGLILFDIG+AHKQL+LSLFEDPP+C  +  E  R+ VRKEKGFEALR
Subjt:  KDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5389.4e-4160.45Show/hide
Query:  IYLILLCLP-QSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSE-SGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDI
        + L+LL +P  + S  S+I +LL ++GLP GL P  V+SYSL + +G LEV L  PC  +FENRV ++ V+KANLSYG L+G++GLTQEELF+WLPVK I
Subjt:  IYLILLCLP-QSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSE-SGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDI

Query:  IVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNP
         V+DP SGL+LFDIG+AHKQ+S SLFEDPP C P
Subjt:  IVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNP

AT3G07460.1 Protein of unknown function, DUF5382.3e-2339.57Show/hide
Query:  IYLILLC--LPQSLSLSS------TIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFV
        + + LLC  L   +S+S+      +I ++L + GLP GL P+ VK ++++ E+G   V+L+  C  K+E  + Y+ +V   + Y  +  + G++ +ELF+
Subjt:  IYLILLC--LPQSLSLSS------TIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFV

Query:  WLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTC
        WL VK I VD P SGLI FD+G+  KQ SLSLFE P  C
Subjt:  WLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTC

AT3G07470.1 Protein of unknown function, DUF5382.1e-2436.05Show/hide
Query:  LCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPK
        + +  ++S + TI+++L + GLP+G+ P+ V+ ++   E+G   V+L+  C  K+E  + Y++ +   +    +  + G++ +ELF+W PVK I VD P 
Subjt:  LCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPK

Query:  SGLILFDIGLAHKQLSLSLFEDPPTCNP----ESTELPRHHVRKEKG
        SGLI FD+G+  KQ SLSLFE P  C P       ELP + V +  G
Subjt:  SGLILFDIGLAHKQLSLSLFEDPPTCNP----ESTELPRHHVRKEKG

AT5G16380.1 Protein of unknown function, DUF5381.4e-2341.72Show/hide
Query:  FFYYTIYLILLCLPQSLSL-SSTIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL
        FF   +    +  PQ  SL   + +D LR   LPAG+VP+ V ++S+  ++G   V L  PC  KFEN+  ++  +   LS G +  + G+TQ+ELF+W 
Subjt:  FFYYTIYLILLCLPQSLSL-SSTIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWL

Query:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTC-----NPESTELPR
         VK I VD   SGLI FD+G+A KQLSLSLFE P  C      P + +L R
Subjt:  PVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTC-----NPESTELPR

AT5G54530.1 Protein of unknown function, DUF5381.1e-4660.53Show/hide
Query:  LILLCLPQSLSLSS----TIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDI
        L+L  L  SLSLSS    T+HD+LRS+GLPAGL+P+EV SY L   G LEVFL  PC  KFE  V +E+VV+ NLSYGSL+GV+GL+Q+ELF+WL VKDI
Subjt:  LILLCLPQSLSLSS----TIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDI

Query:  IVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEA
        +V++P SG+I+FDIG+A KQLSLSLFEDPP C P+   + +  +R+++GFEA
Subjt:  IVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTTCTTCTATTACACAATTTACCTCATCCTTCTCTGTCTTCCACAATCCCTTAGTCTCTCCTCCACCATCCACGACCTCCTCCGGTCGAAGGGGCTGCCGGC
GGGGCTTGTTCCGAGGGAGGTAAAATCCTACTCCCTCTCTGAAAGCGGCCTTCTGGAAGTGTTCCTGGACGGCCCTTGTCTGACCAAATTCGAGAACAGGGTTCTGTATG
AGAGCGTGGTTAAGGCGAATCTGAGCTACGGAAGTCTGATCGGCGTTCAGGGGCTGACTCAGGAGGAGCTGTTTGTATGGCTTCCAGTGAAGGACATAATCGTGGATGAC
CCTAAATCCGGCCTTATTCTCTTTGACATTGGCCTCGCTCATAAGCAACTCTCCCTTTCTCTGTTCGAAGACCCCCCCACCTGCAACCCTGAATCTACAGAGCTTCCGCG
GCATCATGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCTTCTTCTATTACACAATTTACCTCATCCTTCTCTGTCTTCCACAATCCCTTAGTCTCTCCTCCACCATCCACGACCTCCTCCGGTCGAAGGGGCTGCCGGC
GGGGCTTGTTCCGAGGGAGGTAAAATCCTACTCCCTCTCTGAAAGCGGCCTTCTGGAAGTGTTCCTGGACGGCCCTTGTCTGACCAAATTCGAGAACAGGGTTCTGTATG
AGAGCGTGGTTAAGGCGAATCTGAGCTACGGAAGTCTGATCGGCGTTCAGGGGCTGACTCAGGAGGAGCTGTTTGTATGGCTTCCAGTGAAGGACATAATCGTGGATGAC
CCTAAATCCGGCCTTATTCTCTTTGACATTGGCCTCGCTCATAAGCAACTCTCCCTTTCTCTGTTCGAAGACCCCCCCACCTGCAACCCTGAATCTACAGAGCTTCCGCG
GCATCATGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATGA
Protein sequenceShow/hide protein sequence
MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDD
PKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR