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Carg24838 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24838
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSpindle pole body component protein
Genome locationCarg_Chr16:6535348..6536430
RNA-Seq ExpressionCarg24838
SyntenyCarg24838
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6598.57Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GS DGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

KAG7015524.1 hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-67100Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]1.8e-6699.29Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

XP_022985273.1 uncharacterized protein LOC111483313 [Cucurbita maxima]4.5e-6597.86Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPI TRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTA SERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]2.6e-5786.62Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+E PE T APGV+E++SLAPITTRKHRRRKR A LPSAAKLA DWKPSLGAISEDKVVLV+ EREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDF--RRSPASIPVVIPAFSPTPFLF
        GSRDGE+RGV+GR+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDF--RRSPASIPVVIPAFSPTPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein8.0e-5281.12Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRK
        MKFLFEFVSCCVPVNMSR++ PE T A G +EM+SL PITTRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRK

Query:  SGSRDGEARGVNGRSNSNDF--RRSPASIPVVIPAFSPTPFLF
        S SRDGE+RGV+GR+NSNDF  R+SP++IPVVIPAFSP PFLF
Subjt:  SGSRDGEARGVNGRSNSNDF--RRSPASIPVVIPAFSPTPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384558.8e-6799.29Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

A0A6J1FP47 uncharacterized protein LOC1114472251.6e-5280Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFL EFVSCCVPV++SR+E PEAT APG EE++SLAPITTR HRRR+RGAL  SAAK+A DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GS++G+ARGV+GR+NSNDFRRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

A0A6J1JD62 uncharacterized protein LOC1114833132.2e-6597.86Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPI TRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTA SERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

A0A6J1JUN0 uncharacterized protein LOC1114890533.0e-5178.57Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFL EFVSCCVPV++SR+E PEAT APG EE++SLAP+TTR H RR+RGA   SAAK+A DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        GSR+G+ARGV+GR+NSNDFRRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein2.7e-0732.14Show/hide
Query:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFL E V  C           + +AA   ++  S    T  K RRR++   +       A+W+PSL  ISE+K   + +  EK++++     +S     
Subjt:  MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
        G     + G + R  S+DF R+  +   VIPAFSPTPF+F
Subjt:  GSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGC
TCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATA
AGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTT
AACGGCCGTAGTAACAGTAACGATTTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
GGAAACTCACCACCACCACAAGTTCCCGGGATTCTACTACGGACGCCGGAGTGGAGAATGGACTCCTGCCGCTTCAGTCTTTGATACAGATTGTCAATTTTTGGTACTTT
CAATTTCGCCTCTTTCTCGGAGTCGGATCAGAGCCTTCGTTCTCGTTCTGACCACTCTCTTCACACCGAGAGACTTGCAGGGCGGTTAGTTTCCCGATGAAATTCCTTTT
TGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCA
GAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTG
TTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAA
CAGTAACGATTTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTTCTACTTTCTGATCAATCA
GGCCCTTGTAATATATGTTATATGTATATATTTTGCATAATAAATTATAATTTAAAAGTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTGTAGCTTGTTT
GGCTGTTCTCTTCAATGGGAACTCTCTGCAATTTAAATGTTCCCATTCTTACATGATGCTTTGATTTCTCTCCACACTGTTTTGGATTATTGTTAGAGAAAAGAATATTG
ATTCTGTTTATGGATCTTTACAGAATTGCGTTGGATGGAGAAGCATAATTTTGGTTGTTCAAGTTTTAGTTATATGGATGCTTTTGAATGT
Protein sequenceShow/hide protein sequence
MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGV
NGRSNSNDFRRSPASIPVVIPAFSPTPFLF