CuGenDBv2

Gene ID	Carg24855
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome location	Carg_Chr16:9187219..9187631
RNA-Seq Expression	Carg24855
Synteny	Carg24855
Gene Ontology terms	NA
InterPro domains	IPR043459 - NFD6/NOXY2-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015719.1 hypothetical protein SDJN02_23356, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-46

100

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

XP_022923170.1 uncharacterized protein LOC111430946 isoform X1 [Cucurbita moschata]

6.3e-45

98.02

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

XP_022923171.1 uncharacterized protein LOC111430946 isoform X2 [Cucurbita moschata]

5.2e-39

97.8

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

XP_022965218.1 uncharacterized protein LOC111465140 isoform X1 [Cucurbita maxima]

4.1e-44

97.03

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

XP_023551885.1 uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo]

1.3e-42

94.06

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSS RTVVRTNSPPKASS PFTLPFN TAPSVRRFSLA++PSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

TrEMBL top hits

e value

%identity

Alignment

A0A6J1E633 uncharacterized protein LOC111430946 isoform X2

2.5e-39

97.8

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1EAY8 uncharacterized protein LOC111430946 isoform X1

3.1e-45

98.02

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1HL39 uncharacterized protein LOC111465140 isoform X3

1.6e-38

93.62

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQ  +
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL

A0A6J1HN90 uncharacterized protein LOC111465140 isoform X1

2.0e-44

97.03

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1HQE3 uncharacterized protein LOC111465140 isoform X2

1.6e-38

96.7

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

SwissProt top hits

e value

%identity

Alignment

Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial

7.9e-06

38.83

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Query:  MASACRRIASRISQSSIRTVVRTNS--PPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS
        MAS CR + S+ + S+ R+ +   S  P  ASSF    P    +P       +R   +LG +QSLLP ++AVA AR+ SCL  +S++ R+L+QG LC  +
Subjt:  MASACRRIASRISQSSIRTVVRTNS--PPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS

Query:  PSL
        P +
Subjt:  PSL

Arabidopsis top hits

e value

%identity

Alignment

AT4G17310.1 unknown protein

3.3e-23

60.19

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Query:  MASACRRIASRISQSSIRTVVR--TNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS
        MASACR++ +R S SS+++ +R  T S   ASS  F LP   T    R FS +R PSELGC+QSLLP H+ VA AR+ SCLST SRS RALSQGTLCCTS
Subjt:  MASACRRIASRISQSSIRTVVR--TNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS

Query:  PSL
        P L
Subjt:  PSL

AT4G17310.2 unknown protein

1.2e-17

56.99

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Query:  MASACRRIASRISQSSIRTVVR--TNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACR++ +R S SS+++ +R  T S   ASS  F LP   T    R FS +R PSELGC+QSLLP H+ VA AR+ SCLST SRS RALSQ
Subjt:  MASACRRIASRISQSSIRTVVR--TNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein

2.3e-16

50.52

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Query:  RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SS ++ +R+          +SP  ASS  F +P    A  + RFS +R PSELGC+QSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.6 unknown protein

2.3e-16

50.52

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Query:  RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SS ++ +R+          +SP  ASS  F +P    A  + RFS +R PSELGC+QSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.7 unknown protein

2.3e-16

50.52

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Query:  RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SS ++ +R+          +SP  ASS  F +P    A  + RFS +R PSELGC+QSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

Sequences

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CDS sequence

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ATGGCTTCCGCTTGCCGAAGAATTGCGAGCAGAATCTCTCAATCCTCCATCAGAACAGTTGTTCGTACAAATTCGCCGCCCAAAGCTTCATCTTTTCCGTTCACTTTACC
TTTCAATTGCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAGGGCCCCGTCGGAGCTGGGATGCATGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAA

mRNA sequence

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Protein sequence

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MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL

Carg24855 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome