; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24890 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24890
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLysine-rich arabinogalactan protein like
Genome locationCarg_Chr08:1943074..1943697
RNA-Seq ExpressionCarg24890
SyntenyCarg24890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593108.1 hypothetical protein SDJN03_12584, partial [Cucurbita argyrosperma subsp. sororia]1.1e-11299.52Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPI+PEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

KAG7025517.1 hypothetical protein SDJN02_12013, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-113100Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

XP_022960408.1 uncharacterized protein LOC111461143 [Cucurbita moschata]1.4e-11097.58Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSR G+FTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPVC PSSPKIQPPSTDCNPKPISPTPRSDPIPI+PEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

XP_023004233.1 uncharacterized protein LOC111497628 [Cucurbita maxima]3.6e-9596.22Show/hide
Query:  MSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDDFDEHCCYNKSSSYPELWAGPTY
        MSR GNFTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPV RPSSPKIQPPSTDCNPKPISPTPRSDPIPI+ EICDDFDEHCCY+KSSSYPELWAGPTY
Subjt:  MSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDDFDEHCCYNKSSSYPELWAGPTY

Query:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE
        SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVD ATRTLKQILHLDIDSE
Subjt:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE

XP_023514559.1 uncharacterized protein LOC111778815 [Cucurbita pepo subsp. pepo]3.6e-11198.07Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSR G+FTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPI+PEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

TrEMBL top hitse value%identityAlignment
A0A6J1D941 uncharacterized protein LOC1110183963.7e-4556.22Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEIC--
        M+ L+I+EQYR EF +    L  +R GN  IKE R + +NR S      FRP PLE+SSIPV R S       S D N  PIS T R+ PIPI+P +C  
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEIC--

Query:  --DDFDEHCCYN-KSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGH-----NHRPSSSRELFHGVD
           D DE  CYN KS S+PELWAGPTYSNSPPASSLP+P FSIR+   +SL+LP  S A+++ +  PIVKSAPPSPTRGH     NH P S+RE FHG D
Subjt:  --DDFDEHCCYN-KSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGH-----NHRPSSSRELFHGVD

Query:  DATRTLKQILHLDIDSE
         ATRTL++IL+L IDSE
Subjt:  DATRTLKQILHLDIDSE

A0A6J1GP91 uncharacterized protein LOC1114558842.6e-4353.77Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEIC--
        M+TL+IVEQYR EF  L K L   RLGN TIKE + +NQ          FRP PL++SSIPV   SSP+  PPS D N  PIS   RS  I I+ EIC  
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEIC--

Query:  ---DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRT
           ++FDEHCCY +  S+PELWAGPTYSNSPPASSLPMP FS+  N  +SL+ PT S A+++ +           PT G    P S+RE FHG D ATRT
Subjt:  ---DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRT

Query:  LKQILHLDIDSE
        L++IL+LDIDSE
Subjt:  LKQILHLDIDSE

A0A6J1H8U6 uncharacterized protein LOC1114611436.6e-11197.58Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSR G+FTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPVC PSSPKIQPPSTDCNPKPISPTPRSDPIPI+PEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

A0A6J1JND6 uncharacterized protein LOC1114884542.9e-4253.55Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEIC--
        M+TL+IVEQYR EF  L K L   RLGN TIKE + +NQ          FRP PL++SSIPV   SSP+  PPS D N  PIS   RS  I I+ EIC  
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEIC--

Query:  --DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTL
          ++FDEHCCY +  S+PELWAGPTYSNSPPA+SLPMP FS+  N  +SL L T S A+++ +           PTRG    P S  E FHG D ATRTL
Subjt:  --DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTL

Query:  KQILHLDIDSE
        ++IL+LDIDSE
Subjt:  KQILHLDIDSE

A0A6J1KYV4 uncharacterized protein LOC1114976281.7e-9596.22Show/hide
Query:  MSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDDFDEHCCYNKSSSYPELWAGPTY
        MSR GNFTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPV RPSSPKIQPPSTDCNPKPISPTPRSDPIPI+ EICDDFDEHCCY+KSSSYPELWAGPTY
Subjt:  MSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDDFDEHCCYNKSSSYPELWAGPTY

Query:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE
        SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVD ATRTLKQILHLDIDSE
Subjt:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein9.0e-2034.42Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTP-----RSDPIPIS-
        M+TL++  ++R +++   K+LG  R  +   K  R+ N      QSG G  P P   SS P+ + +  ++Q P +  +  P+   P     R+ PIPI+ 
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTP-----RSDPIPIS-

Query:  ---PEICDDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD
            +I     E     +S SY ELWAGPTYSNSPP +S+P+P FS+++   +SL  P   +A  IR    + KSAP SPT       SS    F     
Subjt:  ---PEICDDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD

Query:  ATRTLKQILHLDIDS
        AT TL+++L+L++++
Subjt:  ATRTLKQILHLDIDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCTTGATGATTGTAGAACAGTATAGATATGAGTTCTTCACTCTGTTCAAGAATCTAGGTATGAGTCGATTGGGGAATTTTACGATTAAAGAAGACAGAGAGGA
AAATCAAAATCGATTGAGTAATCAATCGGGGACAGGATTTCGCCCTGTTCCATTGGAGATGTCTTCGATTCCTGTTTGTCGTCCTTCTTCCCCAAAGATTCAACCCCCTT
CGACTGATTGTAACCCTAAACCGATTTCACCAACTCCAAGAAGTGATCCGATTCCGATTAGTCCTGAAATTTGTGATGATTTTGATGAACATTGCTGTTATAATAAGAGT
TCATCCTACCCTGAGCTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAATTTCTCAATTCGAAGAAATATAATTTTGTCACTCCA
ATTGCCCACCGGTTCAACCGCTCAAGCAATCAGAAGAACTCAACCAATTGTGAAATCTGCACCACCATCCCCAACGCGGGGCCATAACCATCGCCCTTCTTCTTCTAGAG
AGCTATTTCATGGTGTTGATGATGCAACAAGAACACTTAAACAAATTCTTCACCTTGATATTGACTCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACCTTGATGATTGTAGAACAGTATAGATATGAGTTCTTCACTCTGTTCAAGAATCTAGGTATGAGTCGATTGGGGAATTTTACGATTAAAGAAGACAGAGAGGA
AAATCAAAATCGATTGAGTAATCAATCGGGGACAGGATTTCGCCCTGTTCCATTGGAGATGTCTTCGATTCCTGTTTGTCGTCCTTCTTCCCCAAAGATTCAACCCCCTT
CGACTGATTGTAACCCTAAACCGATTTCACCAACTCCAAGAAGTGATCCGATTCCGATTAGTCCTGAAATTTGTGATGATTTTGATGAACATTGCTGTTATAATAAGAGT
TCATCCTACCCTGAGCTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAATTTCTCAATTCGAAGAAATATAATTTTGTCACTCCA
ATTGCCCACCGGTTCAACCGCTCAAGCAATCAGAAGAACTCAACCAATTGTGAAATCTGCACCACCATCCCCAACGCGGGGCCATAACCATCGCCCTTCTTCTTCTAGAG
AGCTATTTCATGGTGTTGATGATGCAACAAGAACACTTAAACAAATTCTTCACCTTGATATTGACTCTGAATGA
Protein sequenceShow/hide protein sequence
MKTLMIVEQYRYEFFTLFKNLGMSRLGNFTIKEDREENQNRLSNQSGTGFRPVPLEMSSIPVCRPSSPKIQPPSTDCNPKPISPTPRSDPIPISPEICDDFDEHCCYNKS
SSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE