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Carg24895 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24895
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUPF0690 protein C1orf52 homolog
Genome locationCarg_Chr08:1911958..1914446
RNA-Seq ExpressionCarg24895
SyntenyCarg24895
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575926.1 hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3759.68Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV
        M WSDEED SSS ESSLSQSDSDADEDS                      KSGKRK+IAVDFDTLKRHGYK G                        L+V
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV

Query:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
        PP +ENEKQDWS STGR+TRENRDTEESYEERQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+ASRG+    E K  +
Subjt:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
KAG7025513.1 hypothetical protein SDJN02_12008, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-89100Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDSKSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRVPPLEENEKQDWSRSTGRKTREN
        MKWSDEEDKSSSIESSLSQSDSDADEDSKSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRVPPLEENEKQDWSRSTGRKTREN
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDSKSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRVPPLEENEKQDWSRSTGRKTREN

Query:  RDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENVEGMQTHAISCSNKAFT
        RDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENVEGMQTHAISCSNKAFT
Subjt:  RDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENVEGMQTHAISCSNKAFT
XP_022150145.1 UPF0690 protein C1orf52 homolog [Momordica charantia]1.4e-3457.61Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR
        M WSDEED SSS +SSLSQSDSDADEDS                       KS KRKS AVDF+ LKRHGYK G                        L 
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR

Query:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERK
        VPP +ENEKQDWS S G++TRENR+TEESYEERQKTRAA EN EQLLT QTR+EK N+SFSQKEKRKRE G+ASRG+    E K
Subjt:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERK
XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]1.3e-3759.68Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV
        M WSDEED SSS ESSLSQSDSDADEDS                      KSGKRK+IAVDFDTLKRHGYK G                        L+V
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV

Query:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
        PP +ENEKQDWS STGR+TRENRDTEESYEERQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+ASRG+    E K  +
Subjt:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]1.7e-3759.68Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV
        M WSDEED SSS ESSLSQSDSDADEDS                      KSGKRKSIAVDFDTLKRHGYK G                        L+V
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV

Query:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
        PP +ENEKQDWS STGR+TRENR+TEESYEERQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+ASRG+    E K  +
Subjt:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
TrEMBL top hitse value%identityAlignment
A0A1S3BRX7 Uncharacterized protein3.4e-3153.61Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR
        M WSDEED S    SSLSQSDSD DED+                         GKRKS+AVDFDTL+RHGY+ G                        L+
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR

Query:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRASRGERLCRERK
        VPP +ENEKQDWS STGR+TRENR+TEESYEERQKTRAA EN EQLLT QTR+          EK NVSFSQKEKRKRE G+ASRG+    E K
Subjt:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRASRGERLCRERK
A0A5D3DRL7 UPF0690 protein C1orf52-like protein3.4e-3153.61Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR
        M WSDEED S    SSLSQSDSD DED+                         GKRKS+AVDFDTL+RHGY+ G                        L+
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR

Query:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRASRGERLCRERK
        VPP +ENEKQDWS STGR+TRENR+TEESYEERQKTRAA EN EQLLT QTR+          EK NVSFSQKEKRKRE G+ASRG+    E K
Subjt:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRASRGERLCRERK
A0A6J1DAL0 UPF0690 protein C1orf52 homolog6.7e-3557.61Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR
        M WSDEED SSS +SSLSQSDSDADEDS                       KS KRKS AVDF+ LKRHGYK G                        L 
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS-----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLR

Query:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERK
        VPP +ENEKQDWS S G++TRENR+TEESYEERQKTRAA EN EQLLT QTR+EK N+SFSQKEKRKRE G+ASRG+    E K
Subjt:  VPPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERK
A0A6J1GNF0 UPF0690 protein C1orf52 homolog6.5e-3859.68Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV
        M WSDEED SSS ESSLSQSDSDADEDS                      KSGKRK+IAVDFDTLKRHGYK G                        L+V
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV

Query:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
        PP +ENEKQDWS STGR+TRENRDTEESYEERQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+ASRG+    E K  +
Subjt:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
A0A6J1JUH2 UPF0690 protein C1orf52 homolog8.5e-3859.68Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV
        M WSDEED SSS ESSLSQSDSDADEDS                      KSGKRKSIAVDFDTLKRHGYK G                        L+V
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDS----------------------KSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRV

Query:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
        PP +ENEKQDWS STGR+TRENR+TEESYEERQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+ASRG+    E K  +
Subjt:  PPLEENEKQDWSRSTGRKTRENRDTEESYEERQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04614.1 unknown protein6.7e-1135.33Show/hide
Query:  MKWSDEED----KSSSIESSLSQSDSDADE---DSKSGKRKS------------IAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRVPPL
        M+W D++D     SS   SS S SDS+ D      K  KRKS             A D+++L++HGYK  G                    + D+  P  
Subjt:  MKWSDEED----KSSSIESSLSQSDSDADE---DSKSGKRKS------------IAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRVPPL

Query:  EENEKQDWSRSTGRKTRENRDTEESYEERQKTR-AAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV
           EKQDWS +TG+  +   + +ESY+ER+ TR AA    E +   Q R ++ N+SFSQKEK+KR+ G+ASRG+    E K  +
Subjt:  EENEKQDWSRSTGRKTRENRDTEESYEERQKTR-AAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGGAGTGATGAAGAGGACAAGTCGTCATCTATAGAGTCGTCTTTATCACAGTCGGATTCAGACGCTGATGAGGATAGCAAATCTGGAAAGCGGAAGAGCATTGC
TGTGGACTTTGATACACTGAAACGCCACGGCTACAAAGACGGGGGAGATTTCTACACCCGTATAAAGAGTGCTTCATTCCACTCTCCACTCTCCACTCTCCAACCGATAT
GGGATCTTAGAGTGCCACCCCTAGAAGAGAATGAGAAGCAAGATTGGTCACGGTCTACTGGTAGGAAGACTCGGGAAAACAGAGACACTGAAGAATCGTATGAAGAGAGA
CAGAAAACAAGAGCTGCATTCGAAAATAGAGAGCAGCTGCTAACCGTGCAAACTCGGGAGGAGAAGAATAATGTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCC
CGGTCGGGCAAGCAGGGGGGAAAGGCTATGTAGAGAAAGAAAAGAGAATGTTGAGGGAATGCAAACCCATGCAATCAGCTGTTCTAACAAAGCATTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGGAGTGATGAAGAGGACAAGTCGTCATCTATAGAGTCGTCTTTATCACAGTCGGATTCAGACGCTGATGAGGATAGCAAATCTGGAAAGCGGAAGAGCATTGC
TGTGGACTTTGATACACTGAAACGCCACGGCTACAAAGACGGGGGAGATTTCTACACCCGTATAAAGAGTGCTTCATTCCACTCTCCACTCTCCACTCTCCAACCGATAT
GGGATCTTAGAGTGCCACCCCTAGAAGAGAATGAGAAGCAAGATTGGTCACGGTCTACTGGTAGGAAGACTCGGGAAAACAGAGACACTGAAGAATCGTATGAAGAGAGA
CAGAAAACAAGAGCTGCATTCGAAAATAGAGAGCAGCTGCTAACCGTGCAAACTCGGGAGGAGAAGAATAATGTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCC
CGGTCGGGCAAGCAGGGGGGAAAGGCTATGTAGAGAAAGAAAAGAGAATGTTGAGGGAATGCAAACCCATGCAATCAGCTGTTCTAACAAAGCATTCACATGAATGCAAA
TCCATGCAACAAACAAAATATAATTACAGTCCCAACCATCTTCATCTGCAAGTAAATGGCAGGCATAGTGAATGGCGTCGAGAAACTAAGGACCACGAGGCTTGCCGAAG
CAGAAACAACGAGATGCCTGGTCTTCAGGTCGCCTTTCTGGATTTGCATCCCAACATCTTCTCATGATATTTGCCAAGGAACTCGGGCAACATCGAGGGATTTCTGGTCG
TAAATTCTGTTGCAAAGAGTGTTTATATTTATGGTGTGAAGAATGAAAAGTCAGAACCTTTAGAAGAAATCAACATACCTGCTGAACAACTGCAGATGAGACTTCAGCAA
AACTGAGATCTGGGTAAGGCATATCGCAACAATATGTTTCCCACAAACATATACCAAAACTATACACATCACATTTACGATTATAAGGCTTGCCATCAAAAACCTCTGGG
GCCATGTAACCAAGGGTGCCAGTCTCTCCAGTCATATCCCTTGGGTTCTGTGCTTCGACTCGGGCGACGCCAAAATCAACGATTTTCAGAGTCCTCTGAGCATCTAGCAG
CACATTTTCTGTTTTGATATCACGGTGTACAATCTTTTTGGAGTGTAGATAGCTCAAACTGCAAGATCAAAATATGCAATAGCCTCAAAACTCAAATCCAAAACATTGGC
ATATTGGAATGATTTGTAAATGTTTACTTACCCTCTAGAAAGATCCAAAACAAGTTGAATTACAACCTTAAGTGCAAGTTTCTTTTTCCTATTTTTTATTAAAAATCCCT
TTAGTGTTCCTCCTGGAAGATACTCAACAACAAC
Protein sequenceShow/hide protein sequence
MKWSDEEDKSSSIESSLSQSDSDADEDSKSGKRKSIAVDFDTLKRHGYKDGGDFYTRIKSASFHSPLSTLQPIWDLRVPPLEENEKQDWSRSTGRKTRENRDTEESYEER
QKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRASRGERLCRERKENVEGMQTHAISCSNKAFT