; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24905 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24905
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationCarg_Chr14:8852730..8854013
RNA-Seq ExpressionCarg24905
SyntenyCarg24905
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018199.1 hypothetical protein SDJN02_20067, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-92100Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRLAIVQHSLSNNSHLRPSDVCSNLWPRFKTKVLEN
        MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRLAIVQHSLSNNSHLRPSDVCSNLWPRFKTKVLEN
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRLAIVQHSLSNNSHLRPSDVCSNLWPRFKTKVLEN

Query:  GSREISKESFESKISEIEIGVICDASKKAIKGRCTLFDFLLDKGEAYFVRGEALVDKSPTSSNLENDHGFIIKE
        GSREISKESFESKISEIEIGVICDASKKAIKGRCTLFDFLLDKGEAYFVRGEALVDKSPTSSNLENDHGFIIKE
Subjt:  GSREISKESFESKISEIEIGVICDASKKAIKGRCTLFDFLLDKGEAYFVRGEALVDKSPTSSNLENDHGFIIKE
XP_008464582.1 PREDICTED: uncharacterized protein LOC103502424 [Cucumis melo]1.3e-2488.06Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        M RW+KPEVYPL+AAMGFVT++CVFQLTRNILINPDVRVNK HRRMGVLENEEEGEKY+EHSLRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
XP_022955974.1 uncharacterized protein LOC111457808 [Cucurbita moschata]1.6e-2798.51Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
XP_022980760.1 uncharacterized protein LOC111480034 [Cucurbita maxima]2.7e-2797.01Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        MARWVKPEVYPLMAAMGFVTT+CVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
XP_023528505.1 uncharacterized protein LOC111791411 [Cucurbita pepo subsp. pepo]8.7e-2692.54Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        MARWVKPEVYPLMAAMGFVTT+CVFQLTRNILINPDVRVNKEHRRMGVLEN EEGEKYA+H+LRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
TrEMBL top hitse value%identityAlignment
A0A1S3CLU5 uncharacterized protein LOC1035024246.1e-2588.06Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        M RW+KPEVYPL+AAMGFVT++CVFQLTRNILINPDVRVNK HRRMGVLENEEEGEKY+EHSLRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
A0A6A6LFD8 Uncharacterized protein1.3e-2279.1Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        M RW+KPEVYPLMAAM FVT++C+FQLTRNIL+NPDVR+NK+HRRM VLENEEEGEKY EH LR+ L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
A0A6J1GXR5 uncharacterized protein LOC1114578087.7e-2898.51Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
A0A6J1IXF3 uncharacterized protein LOC1114800341.3e-2797.01Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        MARWVKPEVYPLMAAMGFVTT+CVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRR L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
U5D603 Uncharacterized protein4.8e-2277.61Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        M RW+KPEVYPLMAAMGFVT+LC+FQLTRN+L+NPDVR+NK HR   VL+NEEEG+KYAEHSLR  L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein1.9e-2368.66Show/hide
Query:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
        M RWV+PEVYPL+ AMGFVT++ VFQLTRN  +NPD R+NKEHR+MG+LEN++EGEKYA+H+ R+ L
Subjt:  MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRL
AT3G48140.1 B12D protein2.8e-1454.69Show/hide
Query:  ARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRR
        +RW++PEVYPL AA G    +C F L RNI  NP+VR  KE+R  G+L+N  EGEKY E+ LR+
Subjt:  ARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGTTGGGTGAAACCAGAGGTTTATCCGCTGATGGCAGCCATGGGGTTTGTGACCACTTTGTGCGTGTTTCAACTTACCAGAAACATTTTGATCAATCCTGACGT
CAGGGTGAATAAAGAGCACCGTAGAATGGGAGTGTTGGAGAACGAAGAGGAAGGAGAGAAGTACGCAGAGCACAGCCTCCGGCGTAGACTTGCAATTGTGCAACACTCAC
TTTCCAACAACAGTCACCTACGGCCAAGCGACGTATGCTCAAACCTCTGGCCCAGATTCAAGACGAAAGTTCTAGAAAACGGGAGTAGAGAGATTTCGAAGGAGAGTTTT
GAAAGCAAGATTTCAGAGATTGAAATTGGTGTTATATGTGATGCAAGCAAAAAGGCTATTAAGGGGAGGTGTACTTTGTTCGATTTCCTGTTAGATAAAGGGGAGGCGTA
CTTTGTTCGAGGGGAGGCGTTGGTGGATAAAAGTCCTACATCGTCTAATTTAGAGAATGATCATGGATTTATAATCAAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCGTTGGGTGAAACCAGAGGTTTATCCGCTGATGGCAGCCATGGGGTTTGTGACCACTTTGTGCGTGTTTCAACTTACCAGAAACATTTTGATCAATCCTGACGT
CAGGGTGAATAAAGAGCACCGTAGAATGGGAGTGTTGGAGAACGAAGAGGAAGGAGAGAAGTACGCAGAGCACAGCCTCCGGCGTAGACTTGCAATTGTGCAACACTCAC
TTTCCAACAACAGTCACCTACGGCCAAGCGACGTATGCTCAAACCTCTGGCCCAGATTCAAGACGAAAGTTCTAGAAAACGGGAGTAGAGAGATTTCGAAGGAGAGTTTT
GAAAGCAAGATTTCAGAGATTGAAATTGGTGTTATATGTGATGCAAGCAAAAAGGCTATTAAGGGGAGGTGTACTTTGTTCGATTTCCTGTTAGATAAAGGGGAGGCGTA
CTTTGTTCGAGGGGAGGCGTTGGTGGATAAAAGTCCTACATCGTCTAATTTAGAGAATGATCATGGATTTATAATCAAAGAATAG
Protein sequenceShow/hide protein sequence
MARWVKPEVYPLMAAMGFVTTLCVFQLTRNILINPDVRVNKEHRRMGVLENEEEGEKYAEHSLRRRLAIVQHSLSNNSHLRPSDVCSNLWPRFKTKVLENGSREISKESF
ESKISEIEIGVICDASKKAIKGRCTLFDFLLDKGEAYFVRGEALVDKSPTSSNLENDHGFIIKE