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Carg24911 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24911
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBRO1 domain-containing protein
Genome locationCarg_Chr15:5254927..5255193
RNA-Seq ExpressionCarg24911
SyntenyCarg24911
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579232.1 Vacuolar-sorting protein BRO1, partial [Cucurbita argyrosperma subsp. sororia]8.8e-43100Show/hide
Query:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

KAG7016746.1 hypothetical protein SDJN02_21856, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-43100Show/hide
Query:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

XP_022939050.1 vacuolar-sorting protein BRO1 [Cucurbita moschata]8.8e-43100Show/hide
Query:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

XP_022992949.1 vacuolar-sorting protein BRO1 [Cucurbita maxima]2.2e-4198.88Show/hide
Query:  MYSSPQQAPPSYHS-PAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQAPPSYHS PAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYHS-PAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

XP_023550344.1 vacuolar-sorting protein BRO1 [Cucurbita pepo subsp. pepo]2.0e-3996.63Show/hide
Query:  MYSSPQQAPPSYH-SPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSS QQAPPSYH SPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAH PQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYH-SPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

TrEMBL top hitse value%identityAlignment
A0A0A0KRN6 BRO1 domain-containing protein1.6e-3487.64Show/hide
Query:  MYSSPQQ-APPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MY+SPQQ  PPSYHSP PAP P TSPYPPHPQA QQPS NHEYGQPAYPGWQGPYYNAH PQPGS+PRPPYT+PNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQ-APPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

A0A5A7TRW3 ALG-2 interacting protein X8.1e-3485.23Show/hide
Query:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQ PPSYHSP P P P TSPYPPHPQA QQPS NHEYGQPAYPGWQG YYN+H PQPGS+PRPPYT+PNQYPPHQQGGYYK Q
Subjt:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

A0A5D3E3T3 ALG-2 interacting protein X8.1e-3485.23Show/hide
Query:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQ PPSYHSP P P P TSPYPPHPQA QQPS NHEYGQPAYPGWQG YYN+H PQPGS+PRPPYT+PNQYPPHQQGGYYK Q
Subjt:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

A0A6J1FLJ5 vacuolar-sorting protein BRO14.3e-43100Show/hide
Query:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

A0A6J1JYV9 vacuolar-sorting protein BRO11.1e-4198.88Show/hide
Query:  MYSSPQQAPPSYHS-PAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
        MYSSPQQAPPSYHS PAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ
Subjt:  MYSSPQQAPPSYHS-PAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAGTTCCCCACAGCAGGCACCCCCTTCCTACCACTCTCCTGCTCCTGCACCTACACCAGGTACTAGTCCCTACCCACCGCACCCCCAGGCACCTCAACAACCTTC
AGCGAACCACGAGTATGGCCAACCTGCGTATCCTGGGTGGCAAGGGCCATACTACAACGCCCATGGTCCACAGCCTGGATCTATGCCTCGGCCTCCTTACACCGTCCCGA
ACCAGTATCCACCACATCAGCAAGGTGGTTACTACAAGCAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACAGTTCCCCACAGCAGGCACCCCCTTCCTACCACTCTCCTGCTCCTGCACCTACACCAGGTACTAGTCCCTACCCACCGCACCCCCAGGCACCTCAACAACCTTC
AGCGAACCACGAGTATGGCCAACCTGCGTATCCTGGGTGGCAAGGGCCATACTACAACGCCCATGGTCCACAGCCTGGATCTATGCCTCGGCCTCCTTACACCGTCCCGA
ACCAGTATCCACCACATCAGCAAGGTGGTTACTACAAGCAACAATAA
Protein sequenceShow/hide protein sequence
MYSSPQQAPPSYHSPAPAPTPGTSPYPPHPQAPQQPSANHEYGQPAYPGWQGPYYNAHGPQPGSMPRPPYTVPNQYPPHQQGGYYKQQ