; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg24914 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24914
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAcyl-[acyl-carrier-protein] hydrolase
Genome locationCarg_Chr15:5232921..5233905
RNA-Seq ExpressionCarg24914
SyntenyCarg24914
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
GO:0016297 - acyl-[acyl-carrier-protein] hydrolase activity (molecular function)
InterPro domainsIPR002864 - Acyl-ACP thioesterase
IPR029069 - HotDog domain superfamily
IPR045023 - Acyl-[acyl-carrier-protein] hydrolase FATA/B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579230.1 Palmitoyl-acyl carrier protein thioesterase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-89100Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

KAG7016743.1 Palmitoyl-acyl carrier protein thioesterase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.8e-91100Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIWYVLL
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIWYVLL
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIWYVLL

XP_022939594.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata]9.3e-8998.81Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYVVRCSIAKEGGDFN+QRYAKVNGGIIRSISEADLLSRSAKASRAL+PSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

XP_022993287.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita maxima]4.2e-8999.4Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRAL+PSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

XP_023551021.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-8797.62Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPV YVVRCSIAKEGGDFNKQRYAKVNGG+IRSISEADLLSRSA ASRAL+PSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

TrEMBL top hitse value%identityAlignment
A0A0A0KT05 Acyl-[acyl-carrier-protein] hydrolase1.2e-7888.69Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYV+RCS AKEG D NK RY KVNG II SISE DLLS+S +ASRALVPSVAENG  VKEDVRQKIPTKKQLVDP+RQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTAT+ES+MNLLQETALNHVWMSGLLSNGFGATHGMM++NLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

A0A1S3CSW2 Acyl-[acyl-carrier-protein] hydrolase1.5e-7989.88Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYV+RCS AKEG D NK RYAKVNG II SISEADLLS+S +ASRALVPSVAENG  VKEDVRQKIPTKKQLVDP+RQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTAT+ES+MNLLQETALNHVWMSGLLSNGFGATHGMM++NLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

A0A5D3E585 Acyl-[acyl-carrier-protein] hydrolase4.2e-7989.29Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYV+RCS AKEG D NK RY KVNG II SISEADLLS+S +ASRALVPSVAENG  VKEDVRQKIPTKKQLVDP+RQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTAT+ES+MNLLQETALNHVWMSGLLSNGFGATHGMM++NLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

A0A6J1FHN8 Acyl-[acyl-carrier-protein] hydrolase4.5e-8998.81Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYVVRCSIAKEGGDFN+QRYAKVNGGIIRSISEADLLSRSAKASRAL+PSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

A0A6J1JSD6 Acyl-[acyl-carrier-protein] hydrolase2.0e-8999.4Show/hide
Query:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
        MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRAL+PSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV
Subjt:  MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTV

Query:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
Subjt:  VIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

SwissProt top hitse value%identityAlignment
G3ESV0 Acyl-[acyl-carrier-protein] hydrolase FATB2, chloroplastic (Fragment)1.5e-2052.81Show/hide
Query:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        L DP+  G +++ G+ +RQ   IRSYE+G D+TA++E++MN LQETALNHV  +GL ++GFG T  M K +LIWVV++M V V+ YP W
Subjt:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

G3ESV1 Acyl-[acyl-carrier-protein] hydrolase FATB3, chloroplastic7.3e-2051.69Show/hide
Query:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        LV+P+     ++ GV +RQ+  IRSYE+G D+TA++E+LMN+ QET+LNH    GLL++GFG T  M K +LIWVV++M +EV+ YP W
Subjt:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

Q39513 Palmitoyl-acyl carrier protein thioesterase, chloroplastic1.3e-2155.06Show/hide
Query:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        LVDP+  G I++ G+ +RQ   IRSYE+G D+TA++E++MN LQETALNHV ++GL ++GFG T  M K +LIWVV++M V V+ YP W
Subjt:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

Q9SJE2 Palmitoyl-acyl carrier protein thioesterase, chloroplastic5.4e-2358.43Show/hide
Query:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        LVDP+  G I++ G+ +RQ   IRSYE+G D++A++E++MN LQETALNHV  +GLL +GFG+T  M K NLIWVV+RM V VD YP W
Subjt:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

Q9SQI3 Palmitoyl-acyl carrier protein thioesterase, chloroplastic6.0e-2256.18Show/hide
Query:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        ++DP+  G I++ G+ + Q   IRSYE+G D+TA++E+LMN LQETA+NH   +GLL  GFGAT  M K NLIWVV+RM V VD YP W
Subjt:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

Arabidopsis top hitse value%identityAlignment
AT1G08510.1 fatty acyl-ACP thioesterases B3.8e-2458.43Show/hide
Query:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        LVDP+  G I++ G+ +RQ   IRSYE+G D++A++E++MN LQETALNHV  +GLL +GFG+T  M K NLIWVV+RM V VD YP W
Subjt:  LVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW

AT3G25110.1 fatA acyl-ACP thioesterase1.4e-1840.8Show/hide
Query:  LLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGAT
        ++S S      LVP  A    VV  D    +     L D  R G + E G+ Y++  V+RSYEVG +KTAT+E++ NLLQE   NH    G  ++GF  T
Subjt:  LLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGAT

Query:  HGMMKHNLIWVVSRMLVEVDHYPIW
          M K +LIWV +RM +E+  YP W
Subjt:  HGMMKHNLIWVVSRMLVEVDHYPIW

AT4G13050.1 Acyl-ACP thioesterase5.4e-1848.28Show/hide
Query:  DPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW
        D  R G ++E G  Y++  ++RSYEVG +KTAT+E++ NLLQE A NHV   G  ++GF  T  M K +LIWV +RM +E+  YP W
Subjt:  DPYRQGLIIEGGVGYRQTVVIRSYEVGPDKTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTCTCTTGCCCTGTTCCTTATGTTGTGAGGTGCTCCATTGCCAAAGAAGGGGGTGATTTTAACAAGCAGAGGTATGCGAAAGTGAATGGGGGTATTATTAG
GTCTATTTCTGAAGCTGATTTGTTGAGCCGATCGGCAAAAGCTTCGAGGGCTCTCGTACCCTCTGTTGCGGAAAATGGGTTTGTTGTTAAAGAAGATGTTCGTCAGAAAA
TTCCCACGAAGAAGCAGTTGGTTGATCCTTATCGACAAGGGTTGATCATTGAAGGGGGTGTTGGGTATAGACAAACTGTTGTGATCAGATCGTATGAAGTTGGTCCTGAT
AAGACTGCAACTATGGAGAGCCTCATGAATCTTCTGCAGGAAACAGCACTTAATCATGTTTGGATGTCTGGGCTTCTCAGCAATGGTTTTGGGGCCACTCATGGCATGAT
GAAGCACAATCTTATCTGGGTAGTTTCACGAATGCTCGTCGAAGTAGACCACTATCCGATATGGTATGTCCTCTTGTAA
mRNA sequenceShow/hide mRNA sequence
TGTCTCATTTCCAGTGTGATGGTGTCTTGACTCGATCACTCAATCTACCATAGTCAAAAGGAACAATTTTCTTTGTTTCTTCCCACAAGACATGTCCATGAAAAGATCAA
ATCATCCCTATCTATTCAACACACCCAAAACCGTCCAAAATCCAAACTACCCATTTGTCCTTCAACACTTACTTGTCGATCAAAACTAAGATTCCATCGCCATTTCAAGT
TATGTTCATCTCTCAGCTTAGAAAAAATGAAATTGTTCGTTTCTTTCTTAGGCTAATCCGCCATTTGCAACTATAAGATTGCGATGGCTGTTTCTCTGTTTCAGAAGCTT
CACAAATGGCTTCTTTCTCTTGCCCTGTTCCTTATGTTGTGAGGTGCTCCATTGCCAAAGAAGGGGGTGATTTTAACAAGCAGAGGTATGCGAAAGTGAATGGGGGTATT
ATTAGGTCTATTTCTGAAGCTGATTTGTTGAGCCGATCGGCAAAAGCTTCGAGGGCTCTCGTACCCTCTGTTGCGGAAAATGGGTTTGTTGTTAAAGAAGATGTTCGTCA
GAAAATTCCCACGAAGAAGCAGTTGGTTGATCCTTATCGACAAGGGTTGATCATTGAAGGGGGTGTTGGGTATAGACAAACTGTTGTGATCAGATCGTATGAAGTTGGTC
CTGATAAGACTGCAACTATGGAGAGCCTCATGAATCTTCTGCAGGAAACAGCACTTAATCATGTTTGGATGTCTGGGCTTCTCAGCAATGGTTTTGGGGCCACTCATGGC
ATGATGAAGCACAATCTTATCTGGGTAGTTTCACGAATGCTCGTCGAAGTAGACCACTATCCGATATGGTATGTCCTCTTGTAA
Protein sequenceShow/hide protein sequence
MASFSCPVPYVVRCSIAKEGGDFNKQRYAKVNGGIIRSISEADLLSRSAKASRALVPSVAENGFVVKEDVRQKIPTKKQLVDPYRQGLIIEGGVGYRQTVVIRSYEVGPD
KTATMESLMNLLQETALNHVWMSGLLSNGFGATHGMMKHNLIWVVSRMLVEVDHYPIWYVLL