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Carg24920 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24920
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:5168895..5169311
RNA-Seq ExpressionCarg24920
SyntenyCarg24920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579224.1 hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6899.28Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSG GAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNLRQRCDSNV
        QISLVSCGGEQVDAKLVLEIYNKLAVSKNLRQRCDSNV
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNLRQRCDSNV

KAG7016737.1 hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-69100Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNLRQRCDSNV
        QISLVSCGGEQVDAKLVLEIYNKLAVSKNLRQRCDSNV
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNLRQRCDSNV

XP_022939174.1 uncharacterized protein LOC111445168 [Cucurbita moschata]2.5e-6093.85Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSF LGRLWRMRRRAPKLRLKMA P K LARFHDAYVKMMTRVAN VGNMYAIGGFGNGKRIPKPRN
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        Q+SLVSCGGEQVDAKLVLE+YNKLA SKNL
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL

XP_022993314.1 uncharacterized protein LOC111489358 [Cucurbita maxima]5.2e-5890Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWR+RRRAPKLRLKM SP K LARFHDAYVKMM RVAN+VG+MYAIGG+GNGKRIPKP N
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        Q+SLVSCGGEQVD KLVLE+YNKLA SKNL
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL

XP_023550637.1 uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo]2.1e-5993.85Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSGTGA RSRSF LGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPK  N
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        Q+SLV CGGEQVDAKLVLE+YNKLA SKNL
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL

TrEMBL top hitse value%identityAlignment
A0A0A0KV01 Uncharacterized protein1.1e-4070.37Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAA-----RSRSFRLGRLWRMRRR-APKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKR
        MDIIAT SA +L+RLWRRR YQRLGSG   +      SRSFR+GR+  MRRR +PK+RLK++SPLKV+A+ HDAYV+MM R+AN+VGNMYAIGGFGN KR
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAA-----RSRSFRLGRLWRMRRR-APKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKR

Query:  IPKPRNQISLVSCGGEQVDAKLVLEIYNKLAVSKN
        IPKP+NQ+ L   GGEQ+DAKLVLEIYNKLA SKN
Subjt:  IPKPRNQISLVSCGGEQVDAKLVLEIYNKLAVSKN

A0A6J1DHB4 uncharacterized protein LOC1110200549.6e-5078.95Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNG---KRIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSFRLGRLWRMRR AP+LR KMASPLK+LARFHDAYV+MM RVAN VGNMYAIG FG G   + IPK
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNG---KRIPK

Query:  PRNQISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        P NQ+SLVSCGGEQVDAKLVLEIYNKLA SKNL
Subjt:  PRNQISLVSCGGEQVDAKLVLEIYNKLAVSKNL

A0A6J1FGC7 uncharacterized protein LOC1114451681.2e-6093.85Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSF LGRLWRMRRRAPKLRLKMA P K LARFHDAYVKMMTRVAN VGNMYAIGGFGNGKRIPKPRN
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        Q+SLVSCGGEQVDAKLVLE+YNKLA SKNL
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL

A0A6J1H4C2 uncharacterized protein LOC1114603571.0e-4674.62Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSA  ++RLWRRR YQ+LGS T   RSRSFRL RLW MRR+A K++LK+ASPLK+LA+FHD YV+MM +VAN+VGN+YAIG FGNGKRIPKPRN
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        Q+SL +C GE VDAK VLEIYNKLA SKNL
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL

A0A6J1JZV2 uncharacterized protein LOC1114893582.5e-5890Show/hide
Query:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN
        MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWR+RRRAPKLRLKM SP K LARFHDAYVKMM RVAN+VG+MYAIGG+GNGKRIPKP N
Subjt:  MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRN

Query:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL
        Q+SLVSCGGEQVD KLVLE+YNKLA SKNL
Subjt:  QISLVSCGGEQVDAKLVLEIYNKLAVSKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G62650.1 unknown protein2.9e-0637.3Show/hide
Query:  KRLWRR-RRYQRL--GSGTGAARSRSFRL-------GRLWRMRRRAPKLR-LKMASPLKVLARFHDAYVKMMTRVANN--VGNM-YAIGGFGNGKRIPKP
        KR WRR R Y++L   S T + R +  R+        R WR+ +  PKLR LK ASP K L    D+YVKMM R+AN+  VG+  Y   GFG+G+     
Subjt:  KRLWRR-RRYQRL--GSGTGAARSRSFRL-------GRLWRMRRRAPKLR-LKMASPLKVLARFHDAYVKMMTRVANN--VGNM-YAIGGFGNGKRIPKP

Query:  RNQISLVSCGGEQVDAKLVLEIYNKL
                   ++ D K+++EIY  +
Subjt:  RNQISLVSCGGEQVDAKLVLEIYNKL

AT3G62650.2 unknown protein2.9e-0637.3Show/hide
Query:  KRLWRR-RRYQRL--GSGTGAARSRSFRL-------GRLWRMRRRAPKLR-LKMASPLKVLARFHDAYVKMMTRVANN--VGNM-YAIGGFGNGKRIPKP
        KR WRR R Y++L   S T + R +  R+        R WR+ +  PKLR LK ASP K L    D+YVKMM R+AN+  VG+  Y   GFG+G+     
Subjt:  KRLWRR-RRYQRL--GSGTGAARSRSFRL-------GRLWRMRRRAPKLR-LKMASPLKVLARFHDAYVKMMTRVANN--VGNM-YAIGGFGNGKRIPKP

Query:  RNQISLVSCGGEQVDAKLVLEIYNKL
                   ++ D K+++EIY  +
Subjt:  RNQISLVSCGGEQVDAKLVLEIYNKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTATAGCAACCCCATCAGCTCTAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGACTAGGAAGCGGCACGGGCGCTGCAAGATCAAGGAGCTTCCG
CCTCGGGCGGCTATGGCGGATGAGACGACGAGCTCCGAAACTACGGTTGAAAATGGCATCCCCGTTGAAAGTTTTAGCGAGGTTCCACGACGCGTATGTAAAGATGATGA
CGAGGGTGGCGAATAATGTGGGGAATATGTATGCCATTGGAGGCTTTGGAAATGGGAAGAGGATACCAAAACCTCGTAATCAAATTTCTCTTGTTTCTTGTGGTGGGGAA
CAAGTTGACGCTAAGTTGGTGTTGGAAATCTATAACAAACTTGCTGTTTCCAAGAACTTGAGACAAAGATGTGATTCAAATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATTATAGCAACCCCATCAGCTCTAAGCTTGAAGAGGCTATGGAGAAGAAGAAGATACCAAAGACTAGGAAGCGGCACGGGCGCTGCAAGATCAAGGAGCTTCCG
CCTCGGGCGGCTATGGCGGATGAGACGACGAGCTCCGAAACTACGGTTGAAAATGGCATCCCCGTTGAAAGTTTTAGCGAGGTTCCACGACGCGTATGTAAAGATGATGA
CGAGGGTGGCGAATAATGTGGGGAATATGTATGCCATTGGAGGCTTTGGAAATGGGAAGAGGATACCAAAACCTCGTAATCAAATTTCTCTTGTTTCTTGTGGTGGGGAA
CAAGTTGACGCTAAGTTGGTGTTGGAAATCTATAACAAACTTGCTGTTTCCAAGAACTTGAGACAAAGATGTGATTCAAATGTATAG
Protein sequenceShow/hide protein sequence
MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLKVLARFHDAYVKMMTRVANNVGNMYAIGGFGNGKRIPKPRNQISLVSCGGE
QVDAKLVLEIYNKLAVSKNLRQRCDSNV