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Carg24931 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24931
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein GIS3-like
Genome locationCarg_Chr15:5069055..5069510
RNA-Seq ExpressionCarg24931
SyntenyCarg24931
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579214.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5090.91Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGL-PRLRLHPTAPTAS
        NPIVS   P   L P+A   S
Subjt:  NPIVSGL-PRLRLHPTAPTAS

KAG7016726.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-79100Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVLHRGGWTRVR
        NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVLHRGGWTRVR
Subjt:  NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVLHRGGWTRVR

XP_022939421.1 zinc finger protein GIS3-like [Cucurbita moschata]2.0e-5090.91Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGL-PRLRLHPTAPTAS
        NPIVS   P   L P+A   S
Subjt:  NPIVSGL-PRLRLHPTAPTAS

XP_022994047.1 zinc finger protein GIS3-like [Cucurbita maxima]4.4e-5080.99Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQ NNPTTRLKLFGFDVQEDLEDDSTPTPSASSDS AAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVL
        NPIVS          AP   LL + V L S  S  PV  P L
Subjt:  NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVL

XP_023550638.1 zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo]1.3e-4989.26Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDS AAPSSGDRKYECQYCYREFAN+QALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGL-PRLRLHPTAPTAS
        NPIVS   P   L P+A   S
Subjt:  NPIVSGL-PRLRLHPTAPTAS

TrEMBL top hitse value%identityAlignment
A0A0A0KRQ5 Multicellular trichome development C2H2 zinc finger transcription factor1.2e-3776.47Show/hide
Query:  MAALEEHYQSKQTNN--PTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATV
        MAALE HYQ+KQ NN   TTRLKLFGFDVQEDL+ D + TP++S   AA PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA V
Subjt:  MAALEEHYQSKQTNN--PTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATV

Query:  FRNPIVSGL-PRLRLHPTA
        FRNPIV+   P   L P+A
Subjt:  FRNPIVSGL-PRLRLHPTA

A0A1S3CSY8 zinc finger protein 6-like1.6e-3775.83Show/hide
Query:  MAALEEHYQSKQTNN---PTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNAT
        MAALE HYQ+KQ NN    TTRLKLFGFDVQEDL+ D + TP++S   AA PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA 
Subjt:  MAALEEHYQSKQTNN---PTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNAT

Query:  VFRNPIVSGL-PRLRLHPTA
        VFRNPIV+   P   L P+A
Subjt:  VFRNPIVSGL-PRLRLHPTA

A0A5D3BNG5 Zinc finger protein 6-like1.6e-3775.83Show/hide
Query:  MAALEEHYQSKQTNN---PTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNAT
        MAALE HYQ+KQ NN    TTRLKLFGFDVQEDL+ D + TP++S   AA PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA 
Subjt:  MAALEEHYQSKQTNN---PTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNAT

Query:  VFRNPIVSGL-PRLRLHPTA
        VFRNPIV+   P   L P+A
Subjt:  VFRNPIVSGL-PRLRLHPTA

A0A6J1FFV2 zinc finger protein GIS3-like9.5e-5190.91Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGL-PRLRLHPTAPTAS
        NPIVS   P   L P+A   S
Subjt:  NPIVSGL-PRLRLHPTAPTAS

A0A6J1JUL8 zinc finger protein GIS3-like2.1e-5080.99Show/hide
Query:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
        MAALEEHYQSKQ NNPTTRLKLFGFDVQEDLEDDSTPTPSASSDS AAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR
Subjt:  MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFR

Query:  NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVL
        NPIVS          AP   LL + V L S  S  PV  P L
Subjt:  NPIVSGLPRLRLHPTAPTASLLFNRVSLGSRDSGYPVAEPVL

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 51.1e-1142.06Show/hide
Query:  QSKQTNNPTTRLKLFGFD-VQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNA-----TVFRNP
        +S   ++    +KLFGF+ +      + T   S SS +     +  +++ECQYC +EFANSQALGGHQNAHKKER + KR QLQA R +     T  + P
Subjt:  QSKQTNNPTTRLKLFGFD-VQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNA-----TVFRNP

Query:  IVSGLPR
        I +   R
Subjt:  IVSGLPR

Q39265 Zinc finger protein 61.6e-1548.7Show/hide
Query:  TTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASR------NATVFRNPIVSG---L
        T+ LKLFG ++   LE  S    S+     +   S  RKYECQYC REFANSQALGGHQNAHKKERQ  KRAQ+ A+R      N     NP++S    L
Subjt:  TTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASR------NATVFRNPIVSG---L

Query:  PRLRLHPTAPTASLL
        P L   P  P   +L
Subjt:  PRLRLHPTAPTASLL

Q84WI0 Zinc finger protein GIS1.6e-0751.67Show/hide
Query:  QEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKR
        +E+ E+D T   S  ++S     S +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR
Subjt:  QEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKR

Q9C9H1 Zinc finger protein GIS37.1e-1950Show/hide
Query:  EEHYQSKQTNNPTTRLKLFGFDV--QEDLEDDSTPT------------PSASS--------DSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKER
        E  + SK T   T+RLKLFGF V  +ED  D S  T            P+ SS                G+RKYECQYC REF NSQALGGHQNAHKKER
Subjt:  EEHYQSKQTNNPTTRLKLFGFDV--QEDLEDDSTPT------------PSASS--------DSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKER

Query:  QQHKRAQLQASRNATV-----------FRNPIVS
        QQ KRAQLQA+RNA              RNPIVS
Subjt:  QQHKRAQLQASRNATV-----------FRNPIVS

Q9FG05 Zinc finger protein GIS25.1e-0940Show/hide
Query:  LKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVF
        ++LFGF+     E+  +      ++ +    + +++++C YC+R F  SQALGGHQNAHK+ERQQ KR  L +  NA  F
Subjt:  LKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVF

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 57.8e-1342.06Show/hide
Query:  QSKQTNNPTTRLKLFGFD-VQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNA-----TVFRNP
        +S   ++    +KLFGF+ +      + T   S SS +     +  +++ECQYC +EFANSQALGGHQNAHKKER + KR QLQA R +     T  + P
Subjt:  QSKQTNNPTTRLKLFGFD-VQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNA-----TVFRNP

Query:  IVSGLPR
        I +   R
Subjt:  IVSGLPR

AT1G67030.1 zinc finger protein 61.2e-1648.7Show/hide
Query:  TTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASR------NATVFRNPIVSG---L
        T+ LKLFG ++   LE  S    S+     +   S  RKYECQYC REFANSQALGGHQNAHKKERQ  KRAQ+ A+R      N     NP++S    L
Subjt:  TTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASR------NATVFRNPIVSG---L

Query:  PRLRLHPTAPTASLL
        P L   P  P   +L
Subjt:  PRLRLHPTAPTASLL

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein5.0e-2050Show/hide
Query:  EEHYQSKQTNNPTTRLKLFGFDV--QEDLEDDSTPT------------PSASS--------DSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKER
        E  + SK T   T+RLKLFGF V  +ED  D S  T            P+ SS                G+RKYECQYC REF NSQALGGHQNAHKKER
Subjt:  EEHYQSKQTNNPTTRLKLFGFDV--QEDLEDDSTPT------------PSASS--------DSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKER

Query:  QQHKRAQLQASRNATV-----------FRNPIVS
        QQ KRAQLQA+RNA              RNPIVS
Subjt:  QQHKRAQLQASRNATV-----------FRNPIVS

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-0851.67Show/hide
Query:  QEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKR
        +E+ E+D T   S  ++S     S +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR
Subjt:  QEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKR

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein3.6e-1040Show/hide
Query:  LKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVF
        ++LFGF+     E+  +      ++ +    + +++++C YC+R F  SQALGGHQNAHK+ERQQ KR  L +  NA  F
Subjt:  LKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCTTGGAGGAGCATTACCAATCCAAACAAACCAACAATCCCACTACTCGCTTGAAGCTCTTTGGATTTGATGTCCAAGAAGATCTTGAAGACGATTCCACCCC
TACTCCCTCTGCCTCCTCCGACTCCGCCGCCGCTCCCTCCTCCGGCGACCGTAAGTACGAGTGCCAGTACTGTTACAGAGAGTTCGCCAACTCCCAAGCCCTCGGCGGCC
ACCAAAATGCCCACAAGAAAGAGCGCCAGCAGCACAAACGCGCCCAATTACAAGCCTCCCGAAACGCCACCGTTTTTAGAAACCCCATCGTTTCTGGTCTCCCACGGCTG
CGTCTTCACCCCACCGCCCCCACCGCCAGCCTTCTTTTCAACCGGGTCTCGCTCGGCTCACGGGATAGTGGATACCCCGTCGCTGAGCCGGTTCTCCACCGTGGAGGATG
GACCCGGGTTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCTTGGAGGAGCATTACCAATCCAAACAAACCAACAATCCCACTACTCGCTTGAAGCTCTTTGGATTTGATGTCCAAGAAGATCTTGAAGACGATTCCACCCC
TACTCCCTCTGCCTCCTCCGACTCCGCCGCCGCTCCCTCCTCCGGCGACCGTAAGTACGAGTGCCAGTACTGTTACAGAGAGTTCGCCAACTCCCAAGCCCTCGGCGGCC
ACCAAAATGCCCACAAGAAAGAGCGCCAGCAGCACAAACGCGCCCAATTACAAGCCTCCCGAAACGCCACCGTTTTTAGAAACCCCATCGTTTCTGGTCTCCCACGGCTG
CGTCTTCACCCCACCGCCCCCACCGCCAGCCTTCTTTTCAACCGGGTCTCGCTCGGCTCACGGGATAGTGGATACCCCGTCGCTGAGCCGGTTCTCCACCGTGGAGGATG
GACCCGGGTTCGATGA
Protein sequenceShow/hide protein sequence
MAALEEHYQSKQTNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSAAAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSGLPRL
RLHPTAPTASLLFNRVSLGSRDSGYPVAEPVLHRGGWTRVR