CuGenDBv2

Gene ID	Carg24962
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S4
Genome location	Carg_Chr04:12690953..12692691
RNA-Seq Expression	Carg24962
Synteny	Carg24962
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000876 - Ribosomal protein S4e IPR002942 - RNA-binding S4 domain IPR005824 - KOW IPR013843 - Ribosomal protein S4e, N-terminal IPR013845 - Ribosomal protein S4e, central region IPR014722 - Ribosomal protein L2, domain 2 IPR032277 - 40S ribosomal protein S4, C-terminal domain IPR036986 - RNA-binding S4 domain superfamily IPR038237 - Ribosomal protein S4e, central domain superfamily IPR041982 - Ribosomal protein S4, KOW domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7032460.1 40S ribosomal protein S4-3 [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-137

100

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

XP_022132117.1 40S ribosomal protein S4-3 [Momordica charantia]

4.2e-135

98.78

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

XP_022930037.1 40S ribosomal protein S4-3-like [Cucurbita moschata]

7.7e-137

100

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

XP_022994321.1 40S ribosomal protein S4-3 [Cucurbita maxima]

1.0e-136

99.59

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCK+RSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

XP_038899765.1 40S ribosomal protein S4-3-like [Benincasa hispida]

1.2e-134

98.37

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BSY6 40S ribosomal protein S4

2.0e-135

98.78

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

A0A6J1D0L7 40S ribosomal protein S4

1.3e-134

97.96

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        ATRLGNVFTIGKGTKPWVSLPKGKG+KLSIIEEARKRLA+QAAVT
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

A0A6J1EP89 40S ribosomal protein S4

3.7e-137

100

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

A0A6J1H190 40S ribosomal protein S4

1.0e-134

96.73

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVISILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREKHKGSFET+HIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        ATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

A0A6J1JYT2 40S ribosomal protein S4

4.9e-137

99.59

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCK+RSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

SwissProt top hits

e value

%identity

Alignment

P46299 40S ribosomal protein S4

2.8e-129

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH++  +E
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
         KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNVFTIGKGTKPWVSLPK KGIKLSIIEEARKRLA Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

P46300 40S ribosomal protein S4

1.7e-131

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVISILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        +KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIE+ARKRLA Q+A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

P49204 40S ribosomal protein S4-2

5.9e-132

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Q8VYK6 40S ribosomal protein S4-3

4.5e-132

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Q93VH9 40S ribosomal protein S4-1

2.9e-131

92.59

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRL+ Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Arabidopsis top hits

e value

%identity

Alignment

AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein

2.1e-132

92.59

Show/hide

Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRL+ Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein

3.9e-86

91.41

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Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein

4.2e-133

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Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein

4.2e-133

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Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein

3.2e-133

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Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Sequences

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CDS sequence

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ATGCTCGACAAACTCGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAATCAAGGGAATGTCTCCCACTGATTTTGATATTGCGTAACAGATTGAAATATGC
TCTCACATACCGTGAGGTAATTTCAATTTTGATGCAACGACATGTTTTAGTTGATGGGAAGGTGAGGACAGACAAGACGTACCCTGCTGGGTTCATGGATGTTGTGTCGA
TTCCCAAAACAAATGAGAATTTCCGGCTTCTCTACGACACAAAAGGCCGATTCCGTCTTCACTCAGTCAGGGATGAAGAGGCTAAGTTTAAGCTGTGCAAAGTTCGGTCA
GTGCAGTTTGGGCAGAAGGGAATTCCTTATCTGAACACTTACGATGGACGAACAATCCGATATCCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTAGACCTCGA
CTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTGGGAAACGTTGTGATGGTGACTGGTGGAAGAAATAGAGGACGAGTTGGAGTAATTAAAAACAGGGAGAAGCACA
AGGGAAGCTTTGAGACAATTCACATTCAGGATGCTACCGGGCATGAATTTGCAACTCGGCTGGGCAATGTGTTTACGATTGGGAAGGGGACAAAGCCATGGGTGTCCCTT
CCCAAGGGCAAGGGTATAAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGCCAACCAAGCAGCCGTTACGGTTTAA

mRNA sequence

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GGCAAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTCGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAAT
CAAGGGAATGTCTCCCACTGATTTTGATATTGCGTAACAGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTGATGCAACGACATGTTTTAGTTGATGGG
AAGGTGAGGACAGACAAGACGTACCCTGCTGGGTTCATGGATGTTGTGTCGATTCCCAAAACAAATGAGAATTTCCGGCTTCTCTACGACACAAAAGGCCGATTCCGTCT
TCACTCAGTCAGGGATGAAGAGGCTAAGTTTAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAGAAGGGAATTCCTTATCTGAACACTTACGATGGACGAACAATCC
GATATCCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTAGACCTCGACTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTGGGAAACGTTGTGATGGTGACT
GGTGGAAGAAATAGAGGACGAGTTGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATTCAGGATGCTACCGGGCATGAATTTGCAACTCG
GCTGGGCAATGTGTTTACGATTGGGAAGGGGACAAAGCCATGGGTGTCCCTTCCCAAGGGCAAGGGTATAAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGCCA
ACCAAGCAGCCGTTACGGTTTAAGAGTTGAGTGTTGTAGTCATGATTCTAAGACTATTTTTGTTTAATATTTGGTGTTCTAATATGATTATAAATTAGATGTTGAGACTA
TTTCTGTTGCTTCTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTGAATATGGAGATGGAAATATTAGCATCTATTAGGAATCTATAATTAACATTTGACCAAAGCTGTT
AAATTTTATAAGATTTAAGTTTTAAGTTTTTTACATATCGGCCATTATTGGTCATAGGTTGTTAGGCCTAGCTT

Protein sequence

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MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRS
VQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSL
PKGKGIKLSIIEEARKRLANQAAVTV

Carg24962 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome