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Carg24966 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg24966
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c
Genome locationCarg_Chr04:12556090..12559835
RNA-Seq ExpressionCarg24966
SyntenyCarg24966
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0010336 - gibberellic acid homeostasis (biological process)
GO:0005758 - mitochondrial intermembrane space (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002327 - Cytochrome c, class IA/ IB
IPR009056 - Cytochrome c-like domain
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146423.1 cytochrome c [Cucumis sativus]5.5e-5899.1Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKEST
        ADLIAYLKEST
Subjt:  ADLIAYLKEST

XP_008452381.1 PREDICTED: cytochrome c [Cucumis melo]5.5e-5898.21Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

XP_020218493.1 cytochrome c [Cajanus cajan]5.5e-5898.21Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

XP_022930036.1 cytochrome c [Cucurbita moschata]6.5e-59100Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

XP_038893188.1 cytochrome c [Benincasa hispida]1.9e-5899.11Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

TrEMBL top hitse value%identityAlignment
A0A0A0KPD8 Cytochrome c domain-containing protein2.7e-5899.1Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKEST
        ADLIAYLKEST
Subjt:  ADLIAYLKEST

A0A151TAR6 Putative cytochrome c At4g10040 family2.7e-5898.21Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A5D3DTP9 Cytochrome c2.7e-5898.21Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A6J1EPS9 cytochrome c3.2e-59100Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A6J1JWC5 cytochrome c3.2e-59100Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

SwissProt top hitse value%identityAlignment
P00051 Cytochrome c3.6e-6098.2Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA

Query:  DLIAYLKESTA
        DLIAYLKE+TA
Subjt:  DLIAYLKESTA

P00052 Cytochrome c1.8e-5997.3Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
        ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA

Query:  DLIAYLKESTA
        DLIAYLKESTA
Subjt:  DLIAYLKESTA

P62772 Cytochrome c2.0e-5896.4Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA

Query:  DLIAYLKESTA
        DLIAYLKE+TA
Subjt:  DLIAYLKESTA

P62773 Cytochrome c2.0e-5896.4Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRA

Query:  DLIAYLKESTA
        DLIAYLKE+TA
Subjt:  DLIAYLKESTA

Q9T0G2 Cytochrome c-21.5e-5894.64Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKE TA
Subjt:  ADLIAYLKESTA

Arabidopsis top hitse value%identityAlignment
AT1G22840.1 CYTOCHROME C-14.5e-5892.86Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

AT1G22840.2 CYTOCHROME C-15.6e-4088.1Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI
        MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEK LYDYLLNPKK +
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI

AT4G10040.1 cytochrome c-21.1e-5994.64Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
        MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDR

Query:  ADLIAYLKESTA
        ADLIAYLKE TA
Subjt:  ADLIAYLKESTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCA
AGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGT
ATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCA
ACTGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCATCCTTCGTGAAACTCTGCGAACCCTAGCTCTCAGATCTGAACGCAACCTCATTCCAACGCCATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGG
AGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAA
CTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACAAAG
ATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCA
CACCCTTTTTACTCTACTCCCTTCATTAAATAAGAACATTGAGGAAAATTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGA
AAATCACAAGAGTTCCCTTTTTTTCGTTAAATTCTTATTTCCCTTCGCTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTATTGGTTTGTGAACATAACTG
CTAAACTTTTTGGTAAAGCCGGTTATGGCAATCCTTTTTCATAATAATAGCACGCTTGTTAGAGCCTATCAATTCATTCATCGATGCTTTATTAGGAAGAATACGCTTAT
GGTGGATATAATTTTGGTATTTTTGCAATGTAGTCTTGAATATCTTGATGTTAGTATGCATCTTTTTTACATTCAAATGATTCACATGGGCACTTCCTCTTCTATTATTT
AGTTAACTTGCCTTGTCAACAACTAAAATATCAGGAGACATGACAGGAATTTGGCTCCATGAATTGACAAGACAGGTAGAGAAAAGTAGCAAGGATTCAGTTGTAGCGTC
TACTCTTCATGAAATAACCAATCACAAAGTTGTATGGTTCCCACTTCTTTAGGGATGGCTCTCCA
Protein sequenceShow/hide protein sequence
MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKES
TA