; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25013 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25013
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSpoU_methylase domain-containing protein
Genome locationCarg_Chr11:6416496..6417340
RNA-Seq ExpressionCarg25013
SyntenyCarg25013
Gene Ontology termsGO:0030488 - tRNA methylation (biological process)
GO:0000049 - tRNA binding (molecular function)
GO:0008173 - RNA methyltransferase activity (molecular function)
InterPro domainsIPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases
IPR033671 - tRNA (guanosine(18)-2'-O)-methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588498.1 hypothetical protein SDJN03_17063, partial [Cucurbita argyrosperma subsp. sororia]1.7e-11197.24Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA SVEVTDSVGSDLEPPEIHTQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HS DVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

KAG7022329.1 hypothetical protein SDJN02_16060 [Cucurbita argyrosperma subsp. argyrosperma]7.8e-117100Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTH
        MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTH
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTH

Query:  SDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQ
        SDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQ
Subjt:  SDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQ

Query:  SVHVVSCDASKRCKND
        SVHVVSCDASKRCKND
Subjt:  SVHVVSCDASKRCKND

XP_022933839.1 uncharacterized protein LOC111441136 [Cucurbita moschata]7.5e-11297.24Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS RCFSSTSAAA SVEVTDSVGSDLEPPEIHTQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

XP_022969711.1 uncharacterized protein LOC111468788 [Cucurbita maxima]2.5e-10794.01Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRIAVRPSLFLLGSCS RTTQ ILPSVSF SPPLSSYSPFFTAVSNHSSRNNPKAV TRCFSSTSAAA SVEVTD+VGSDLEPPEIHTQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDVARLMKMERRPINLDG EYP QGRWFPYLDKFSCE+SWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

XP_023530258.1 uncharacterized protein LOC111792877 [Cucurbita pepo subsp. pepo]3.2e-11096.31Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRIAVRPSLFLLGSCS RTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA SVEVTDSVGSDLEPPEIH QDTVE+LLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

TrEMBL top hitse value%identityAlignment
A0A0A0LC15 SpoU_methylase domain-containing protein1.3e-8074.54Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTH
        MASCRI  R SLFLL SCSPR TQRI  SV   S  L S+S FFT   N  SR+NP AVSTRCF+S SAA S    + + +D+EPPE+ TQDTVEHLLTH
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTH

Query:  SDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQ
        S+DVARLMKMERR + LDG EYP +GRWFPYLDK+SC SSWLNSGE+L+ALD LILDSRKERFKNVVR+RSYSVCLVVEGL+DFGNVSAAFRSADALGFQ
Subjt:  SDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQ

Query:  SVHVVSCDASKRCKND
        SVHVVSCDASKR + +
Subjt:  SVHVVSCDASKRCKND

A0A1S3B8M3 tRNA (Guanosine(18)-2'-O)-methyltransferase3.8e-7774.65Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAAS-VEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRI  R SL LL S SPR TQR+ PSV   S  L S SPFFT   N  SR+NP AVS+RCF+S SAA S +E+ D V +D+EPPE+ TQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAAS-VEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDV+RLMKMERRP+ LDG EYP +GRWFPYLDK+S  SSWLNSGE+L+ALD LILD+RKERFKNVVR+RSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

A0A5A7UJ80 tRNA (Guanosine(18)-2'-O)-methyltransferase3.8e-7774.65Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAAS-VEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRI  R SL LL S SPR TQR+ PSV   S  L S SPFFT   N  SR+NP AVS+RCF+S SAA S +E+ D V +D+EPPE+ TQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAAS-VEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDV+RLMKMERRP+ LDG EYP +GRWFPYLDK+S  SSWLNSGE+L+ALD LILD+RKERFKNVVR+RSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

A0A6J1F0V5 uncharacterized protein LOC1114411363.6e-11297.24Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS RCFSSTSAAA SVEVTDSVGSDLEPPEIHTQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

A0A6J1HYK4 uncharacterized protein LOC1114687881.2e-10794.01Show/hide
Query:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT
        MASCRIAVRPSLFLLGSCS RTTQ ILPSVSF SPPLSSYSPFFTAVSNHSSRNNPKAV TRCFSSTSAAA SVEVTD+VGSDLEPPEIHTQDTVEHLLT
Subjt:  MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLT

Query:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
        HSDDVARLMKMERRPINLDG EYP QGRWFPYLDKFSCE+SWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF
Subjt:  HSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGF

Query:  QSVHVVSCDASKRCKND
        QSVHVVSCDASKR + +
Subjt:  QSVHVVSCDASKRCKND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein6.1e-3560.98Show/hide
Query:  QDTVEHLL-THSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSA
        +DTV+ LL T+  + + LMKMERR  +L   E   +G WFPY D+F C    L+S EVL+A+ P +++ R +RF+ VV +RSYSVCLVVEGLSDFGN+SA
Subjt:  QDTVEHLL-THSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSA

Query:  AFRSADALGFQSVHVVSCDASKR
        AFRSADALG QSVHVVSCD+SKR
Subjt:  AFRSADALGFQSVHVVSCDASKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTGCAGAATCGCAGTCCGACCTTCACTATTTCTACTTGGAAGCTGCAGTCCCCGTACAACTCAACGAATTCTCCCTTCTGTTTCCTTCTCCTCACCACCGCT
TTCTTCCTACTCTCCATTCTTCACCGCCGTCTCAAACCATTCCTCAAGAAACAACCCTAAGGCAGTTTCTACAAGATGTTTTTCCTCGACTTCGGCCGCTGCATCAGTAG
AAGTAACAGACTCTGTAGGAAGTGACCTAGAACCGCCGGAGATTCATACACAAGACACGGTGGAGCACCTTCTCACACACTCCGATGACGTTGCCAGGTTGATGAAGATG
GAGCGGAGGCCGATTAATTTAGATGGAGATGAATATCCGCGTCAAGGGCGATGGTTTCCGTACCTGGATAAGTTTAGCTGTGAAAGTTCTTGGTTGAATAGTGGTGAGGT
TTTGGACGCCTTGGATCCTCTCATATTGGACTCGAGGAAAGAGCGGTTCAAGAACGTCGTGCGACACAGGAGCTATTCGGTTTGTTTGGTGGTAGAAGGTTTGAGTGATT
TCGGTAACGTCTCGGCGGCGTTTCGATCTGCCGATGCACTTGGATTTCAGTCGGTTCATGTGGTCTCTTGCGACGCTTCCAAAAGGTGCAAGAATGATTGA
mRNA sequenceShow/hide mRNA sequence
CACTGCATTTGTGGATGAGGAGGAGGGTGTCTATCTTTTCTTCTACCGCTGTCTGAACCGTCGAAGCTCTTCAACGCGCAGCCATGGCGTCCTGCAGAATCGCAGTCCGA
CCTTCACTATTTCTACTTGGAAGCTGCAGTCCCCGTACAACTCAACGAATTCTCCCTTCTGTTTCCTTCTCCTCACCACCGCTTTCTTCCTACTCTCCATTCTTCACCGC
CGTCTCAAACCATTCCTCAAGAAACAACCCTAAGGCAGTTTCTACAAGATGTTTTTCCTCGACTTCGGCCGCTGCATCAGTAGAAGTAACAGACTCTGTAGGAAGTGACC
TAGAACCGCCGGAGATTCATACACAAGACACGGTGGAGCACCTTCTCACACACTCCGATGACGTTGCCAGGTTGATGAAGATGGAGCGGAGGCCGATTAATTTAGATGGA
GATGAATATCCGCGTCAAGGGCGATGGTTTCCGTACCTGGATAAGTTTAGCTGTGAAAGTTCTTGGTTGAATAGTGGTGAGGTTTTGGACGCCTTGGATCCTCTCATATT
GGACTCGAGGAAAGAGCGGTTCAAGAACGTCGTGCGACACAGGAGCTATTCGGTTTGTTTGGTGGTAGAAGGTTTGAGTGATTTCGGTAACGTCTCGGCGGCGTTTCGAT
CTGCCGATGCACTTGGATTTCAGTCGGTTCATGTGGTCTCTTGCGACGCTTCCAAAAGGTGCAAGAATGATTGA
Protein sequenceShow/hide protein sequence
MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKM
ERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND