; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25014 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25014
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptiontRNA (Guanosine(18)-2'-O)-methyltransferase
Genome locationCarg_Chr11:6414984..6416085
RNA-Seq ExpressionCarg25014
SyntenyCarg25014
Gene Ontology termsGO:0030488 - tRNA methylation (biological process)
GO:0000049 - tRNA binding (molecular function)
GO:0009020 - tRNA (guanosine-2'-O-)-methyltransferase activity (molecular function)
GO:0052665 - tRNA (uracil-2'-O-)-methyltransferase activity (molecular function)
InterPro domainsIPR001537 - tRNA/rRNA methyltransferase, SpoU type
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases
IPR033671 - tRNA (guanosine(18)-2'-O)-methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588498.1 hypothetical protein SDJN03_17063, partial [Cucurbita argyrosperma subsp. sororia]5.8e-82100Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

KAG7022328.1 trmH-like, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-82100Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

XP_022933839.1 uncharacterized protein LOC111441136 [Cucurbita moschata]5.8e-82100Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

XP_022969711.1 uncharacterized protein LOC111468788 [Cucurbita maxima]6.4e-8198.7Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHC+IPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSG EVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

XP_023530258.1 uncharacterized protein LOC111792877 [Cucurbita pepo subsp. pepo]5.8e-82100Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

TrEMBL top hitse value%identityAlignment
A0A0A0LC15 SpoU_methylase domain-containing protein1.2e-7290.26Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECF+ILKSRGYRIVSTHLG+NAVSVYDMDWSCPTAIVVGNESRGIS+EALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVC+
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTS ERQILLAEFSLRH+K+AIS+A+E AKRK S+ SS +EVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

A0A5A7UJ80 tRNA (Guanosine(18)-2'-O)-methyltransferase1.0e-7188.89Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNST ECF+ILKSRGYRIVSTHLG+NAVSVYDMDWSCPTAIVVGNESRGIS+EALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVL
        RTSRLGCHGDLTS ERQILLAEFSLRH+K+AIS+A+E AKRK S+ SS   +L
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVL

A0A6J1CU01 uncharacterized protein LOC1110142062.6e-7289.61Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECF+ LKSRGYRIVSTHLG+NAVSVYDMDW CPTAIVVGNESRGISDEALELSD+HCSIPMNGMVDSFNVSVAAGILMHHAV D
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDL+S ERQILLAEFSLRH+KNAISVA+EYAKRK  +TSSG+E  L
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

A0A6J1F0V5 uncharacterized protein LOC1114411362.8e-82100Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

A0A6J1HYK4 uncharacterized protein LOC1114687883.1e-8198.7Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHC+IPMNGMVDSFNVSVAAGILMHHAVCD
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL
        RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSG EVLL
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL

SwissProt top hitse value%identityAlignment
O67577 tRNA (guanosine(18)-2'-O)-methyltransferase2.6e-1639.81Show/hide
Query:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR
        G+ KW+ IE  ++  +     K+RG++IV+T L   +V+  ++D++ PT +VVGNE +G+S E +E++D    IPM GM  S NVSVA GI+++ A   R
Subjt:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR

Query:  TSR
          +
Subjt:  TSR

P0AGJ2 tRNA (guanosine(18)-2'-O)-methyltransferase4.4e-1637.1Show/hide
Query:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR
        G+  W+ ++   +  +    LK +G +I++THL  NAV   ++D++ PT I++G E  GI+ EAL L+D    IPM GMV S NVSVA+ ++++ A   R
Subjt:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR

Query:  TSR---LGCHGDLTSIERQILLAE
         +    L  +  L   E+Q LL E
Subjt:  TSR---LGCHGDLTSIERQILLAE

P0AGJ3 tRNA (guanosine(18)-2'-O)-methyltransferase4.4e-1637.1Show/hide
Query:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR
        G+  W+ ++   +  +    LK +G +I++THL  NAV   ++D++ PT I++G E  GI+ EAL L+D    IPM GMV S NVSVA+ ++++ A   R
Subjt:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR

Query:  TSR---LGCHGDLTSIERQILLAE
         +    L  +  L   E+Q LL E
Subjt:  TSR---LGCHGDLTSIERQILLAE

P0AGJ4 tRNA (guanosine(18)-2'-O)-methyltransferase4.4e-1637.1Show/hide
Query:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR
        G+  W+ ++   +  +    LK +G +I++THL  NAV   ++D++ PT I++G E  GI+ EAL L+D    IPM GMV S NVSVA+ ++++ A   R
Subjt:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDR

Query:  TSR---LGCHGDLTSIERQILLAE
         +    L  +  L   E+Q LL E
Subjt:  TSR---LGCHGDLTSIERQILLAE

Q72GI1 tRNA (guanosine(18)-2'-O)-methyltransferase2.2e-1541.67Show/hide
Query:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHA
        G+ KW+ + +     E FR LK RG+ + +T L  +A    ++D++ PTA++ G E  G+S+EAL L+D    IPM GMV S NVSVAA +++  A
Subjt:  GAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHA

Arabidopsis top hitse value%identityAlignment
AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein2.6e-6475Show/hide
Query:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD
        MGAEKWLDIE W++  ECF++LKSRGYRI +THLG + VS+YDMDWSCPTAIVVGNE RGISDEALELSDL CSIPMNGMVDSFNVSVAAGILMHHAV D
Subjt:  MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCD

Query:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSS
        RT+RLG HGDL+  E++IL+AEFSLRH++++I +A+E+AKRK   ++S
Subjt:  RTSRLGCHGDLTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCAGAGAAATGGTTGGACATTGAACTTTGGAACTCAACCCCAGAATGTTTTAGAATTCTGAAATCTCGGGGTTACAGAATAGTATCGACACATCTAGGATCGAA
TGCGGTTTCCGTTTATGATATGGATTGGTCGTGTCCAACTGCAATTGTGGTTGGAAATGAAAGTAGGGGAATAAGTGATGAAGCCCTGGAGCTATCAGATTTGCATTGCA
GTATTCCCATGAATGGAATGGTAGATTCCTTCAACGTATCAGTTGCTGCTGGCATCCTCATGCACCATGCTGTTTGCGATCGAACATCTCGATTGGGCTGCCATGGAGAT
CTCACATCAATAGAAAGGCAAATTCTACTGGCGGAGTTCTCACTACGGCATAACAAGAACGCAATCAGCGTTGCCCACGAGTATGCGAAGAGGAAGAGTAGTAGCACGAG
CTCGGGTTCGGAGGTGTTGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCAGAGAAATGGTTGGACATTGAACTTTGGAACTCAACCCCAGAATGTTTTAGAATTCTGAAATCTCGGGGTTACAGAATAGTATCGACACATCTAGGATCGAA
TGCGGTTTCCGTTTATGATATGGATTGGTCGTGTCCAACTGCAATTGTGGTTGGAAATGAAAGTAGGGGAATAAGTGATGAAGCCCTGGAGCTATCAGATTTGCATTGCA
GTATTCCCATGAATGGAATGGTAGATTCCTTCAACGTATCAGTTGCTGCTGGCATCCTCATGCACCATGCTGTTTGCGATCGAACATCTCGATTGGGCTGCCATGGAGAT
CTCACATCAATAGAAAGGCAAATTCTACTGGCGGAGTTCTCACTACGGCATAACAAGAACGCAATCAGCGTTGCCCACGAGTATGCGAAGAGGAAGAGTAGTAGCACGAG
CTCGGGTTCGGAGGTGTTGCTGTAG
Protein sequenceShow/hide protein sequence
MGAEKWLDIELWNSTPECFRILKSRGYRIVSTHLGSNAVSVYDMDWSCPTAIVVGNESRGISDEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCDRTSRLGCHGD
LTSIERQILLAEFSLRHNKNAISVAHEYAKRKSSSTSSGSEVLL