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Carg25054 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25054
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionZinc finger protein
Genome locationCarg_Chr06:6119558..6120097
RNA-Seq ExpressionCarg25054
SyntenyCarg25054
Gene Ontology termsGO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044246 - Zinc finger protein 3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8407216.1 hypothetical protein HHK36_006343 [Tetracentron sinense]3.2e-1541.3Show/hide
Query:  DSQTETKQSPKDKSHQ-PFTLNLSPNNDNDL--EELNLIDIFGHACKEEAA--EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED-------
        + Q + K+  ++ +H     L+LS  + N +   ELNLI+ F   C + A+  EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G +        
Subjt:  DSQTETKQSPKDKSHQ-PFTLNLSPNNDNDL--EELNLIDIFGHACKEEAA--EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED-------

Query:  ---------------PFIGCYRSSFGVQTNSMVLRKFY
                       P  G    S G+Q +SM+ + FY
Subjt:  ---------------PFIGCYRSSFGVQTNSMVLRKFY

KAG6607668.1 Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]9.1e-9597.77Show/hide
Query:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE
        MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNL PNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE
Subjt:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE

Query:  DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL
        DPF G YRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVG WHEQYSKSTKRNESLELECLDLSLKL
Subjt:  DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL

KAG7028483.1 Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-98100Show/hide
Query:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE
        MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE
Subjt:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE

Query:  DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL
        DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL
Subjt:  DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL

XP_023548450.1 zinc finger protein 3-like [Cucurbita pepo subsp. pepo]1.2e-1435.74Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLSPNNDN-DL------EELNLIDIF---------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA
        DS  E K     K   P  ++L P+  N DL      EELNLID F          H  KE AA+PRVFSCN+C R+F SSQALGGHQNAH+R+RK+A+ 
Subjt:  DSQTETKQSPKDKSHQPFTLNLSPNNDN-DL------EELNLIDIF---------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA

Query:  GFE---------------DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWR---------------GGWKAS-----------------AVD
        G +                PF G +  S G+Q +SM+ + F   H     V GSFRS+                G W  S                 A  
Subjt:  GFE---------------DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWR---------------GGWKAS-----------------AVD

Query:  VGSWHEQYSKST------KRNESLELECLDLSLKL
         G W    +  T        NE  +L+CLDLSL+L
Subjt:  VGSWHEQYSKST------KRNESLELECLDLSLKL

XP_038896249.1 zinc finger protein 3-like [Benincasa hispida]7.1e-1535.45Show/hide
Query:  KDKSHQPFTLNLSPNNDNDL------EELNLIDIFG----------HACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE-------
        KD S +  +L+L  +N  DL      EELNL+D F              +E AA+PRVFSCNYC RKFFSSQALGGHQNAHSRERK+AK G +       
Subjt:  KDKSHQPFTLNLSPNNDNDL------EELNLIDIFG----------HACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE-------

Query:  --------DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSW--HEQYSKSTK---------------------------
                 P  G +  S G+Q  S++ + F      G L       W      + V  G W   E Y   T                            
Subjt:  --------DPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSW--HEQYSKSTK---------------------------

Query:  ----RNESLELECLDLSLKL
             NE  EL+CLDLSL+L
Subjt:  ----RNESLELECLDLSLKL

TrEMBL top hitse value%identityAlignment
A0A2K3N626 Zinc finger protein 3-like1.7e-1438.41Show/hide
Query:  ETKQSPKDKSHQPFTLNLSPN---NDNDLEELNLIDIFGHACKEEAAE---------PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPF--
        +TK   +        L+LS     +D   +ELNL++ F     E ++E         PRVFSCNYCQRKF+SSQALGGHQNAH RER LA+ G+      
Subjt:  ETKQSPKDKSHQPFTLNLSPN---NDNDLEELNLIDIFGHACKEEAAE---------PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPF--

Query:  ----IGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVD
             G    S G+Q +SM+ +  Y+K   G    G     + GWK    D
Subjt:  ----IGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVD

A0A2R6QMR5 Zinc finger protein1.0e-1437.28Show/hide
Query:  QQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHAC--------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED--
        ++D++ E ++  +++  Q   L ++P+  N   ELNLID   +          +E  AEPRVFSCNYCQRKFFSSQALGGHQNAH RER LAK G +   
Subjt:  QQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHAC--------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED--

Query:  --------------------PFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVD
                            P  G Y  S G+Q +SM+ +  Y     G  +RG +     GW    +D
Subjt:  --------------------PFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVD

A0A5N6QD63 C2H2-type domain-containing protein1.0e-1443.41Show/hide
Query:  TKQSPKDKSHQPFTLNLSPNNDN--DLEELNLIDIF-GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK------AGFED--------
        TK+  + +      L+LS  + N   + ELNLID F  ++ +    EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK      AGF +        
Subjt:  TKQSPKDKSHQPFTLNLSPNNDN--DLEELNLIDIF-GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK------AGFED--------

Query:  PFIGCYRSSFGVQTNSMVLRKFYRKHGRG
        P  G +  S G+Q +SM+ +  ++    G
Subjt:  PFIGCYRSSFGVQTNSMVLRKFYRKHGRG

A0A6A3A4R5 Zinc finger protein 71.7e-1437.33Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIF--------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFI-
        D+  + ++ P+ K      L+L  +N     ELN +D F            +    EPRVFSCNYCQRKFFSSQALGGHQNAH RER LA+ G   P + 
Subjt:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIF--------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFI-

Query:  -GCYRSSFGVQTNSMVLRKFYRKHGRGE---LVRGSFRSWRGGWKASAVD
         G     +    +  +   F +  G GE   + + +F  W  GW    VD
Subjt:  -GCYRSSFGVQTNSMVLRKFYRKHGRGE---LVRGSFRSWRGGWKASAVD

A0A6P3Z4Q7 zinc finger protein 11.3e-1436.05Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIF------------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED
        D +   K   + K+     L+LS +N++   ELNLID F             H  +    EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G + 
Subjt:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIF------------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED

Query:  -----------------------PFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVD
                               P  G +  S G+Q +SM+ +  Y+ +     V  S    R GW    +D
Subjt:  -----------------------PFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVD

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 26.5e-1179.49Show/hide
Query:  EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE
        +PRVFSCNYCQRKF+SSQALGGHQNAH  ER LAK   E
Subjt:  EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFE

Q39262 Zinc finger protein 31.3e-1157.14Show/hide
Query:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG
        N   ELNLID              + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK G
Subjt:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG

Q39263 Zinc finger protein 45.3e-1338.22Show/hide
Query:  SQTETKQSPKDKSHQPFTLNLS------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--
        SQ  +  SP  + ++P +LNLS       NN+ DLE  +L                  ++ +   RVFSCNYCQRKF+SSQALGGHQNAH RER LAK  
Subjt:  SQTETKQSPKDKSHQPFTLNLS------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--

Query:  --AGFEDPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDV
           G    F G   SS      +         HG G     SFR+      +SA DV
Subjt:  --AGFEDPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDV

Q39266 Zinc finger protein 72.2e-1149.41Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK
        D+  ET  S   ++     L+   +N   L +L L D F    K    E  PRVFSCNYC+RKF+SSQALGGHQNAH RER +AK
Subjt:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK

Q42485 Zinc finger protein 11.6e-1453.49Show/hide
Query:  KDKSHQPFTLNLS--PNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG
        K + HQ   L L+          ELNLID F  +          +E+ A+PRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G
Subjt:  KDKSHQPFTLNLS--PNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.6e-1249.41Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK
        D+  ET  S   ++     L+   +N   L +L L D F    K    E  PRVFSCNYC+RKF+SSQALGGHQNAH RER +AK
Subjt:  DSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK

AT1G66140.1 zinc finger protein 43.8e-1438.22Show/hide
Query:  SQTETKQSPKDKSHQPFTLNLS------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--
        SQ  +  SP  + ++P +LNLS       NN+ DLE  +L                  ++ +   RVFSCNYCQRKF+SSQALGGHQNAH RER LAK  
Subjt:  SQTETKQSPKDKSHQPFTLNLS------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--

Query:  --AGFEDPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDV
           G    F G   SS      +         HG G     SFR+      +SA DV
Subjt:  --AGFEDPFIGCYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDV

AT1G80730.1 zinc-finger protein 11.2e-1553.49Show/hide
Query:  KDKSHQPFTLNLS--PNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG
        K + HQ   L L+          ELNLID F  +          +E+ A+PRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G
Subjt:  KDKSHQPFTLNLS--PNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein2.7e-1243.3Show/hide
Query:  EELNLIDIFGHAC------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG---------------FEDPFIGCYRS-SFGVQTNSM
        +ELNL+D               + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK G                  PF G Y + + G+Q +SM
Subjt:  EELNLIDIFGHAC------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG---------------FEDPFIGCYRS-SFGVQTNSM

AT5G25160.1 zinc finger protein 39.2e-1357.14Show/hide
Query:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG
        N   ELNLID              + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK G
Subjt:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGATAGCCAAACAGAAACAAAACAAAGCCCAAAGGACAAATCCCATCAACCTTTTACCCTCAACCTAAGCCC
CAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGAAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGA
AGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTGAAGACCCTTTCATTGGATGCTATAGATCATCC
TTTGGAGTTCAAACAAATTCTATGGTGCTTCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGCGCGGCGGTTGGAAGGCGTC
TGCAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTACTAAACGTAATGAATCGCTCGAGCTAGAGTGTTTAGATTTGTCTCTTAAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGATAGCCAAACAGAAACAAAACAAAGCCCAAAGGACAAATCCCATCAACCTTTTACCCTCAACCTAAGCCC
CAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGAAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGA
AGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTGAAGACCCTTTCATTGGATGCTATAGATCATCC
TTTGGAGTTCAAACAAATTCTATGGTGCTTCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGCGCGGCGGTTGGAAGGCGTC
TGCAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTACTAAACGTAATGAATCGCTCGAGCTAGAGTGTTTAGATTTGTCTCTTAAGCTGTGA
Protein sequenceShow/hide protein sequence
MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFIGCYRSS
FGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL