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Carg25065 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25065
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNucleoside diphosphate kinase
Genome locationCarg_Chr06:6015779..6016204
RNA-Seq ExpressionCarg25065
SyntenyCarg25065
Gene Ontology termsGO:0006165 - nucleoside diphosphate phosphorylation (biological process)
GO:0006183 - GTP biosynthetic process (biological process)
GO:0006228 - UTP biosynthetic process (biological process)
GO:0006241 - CTP biosynthetic process (biological process)
GO:0004550 - nucleoside diphosphate kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001564 - Nucleoside diphosphate kinase
IPR023005 - Nucleoside diphosphate kinase, active site
IPR034907 - Nucleoside diphosphate kinase-like domain
IPR036850 - Nucleoside diphosphate kinase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC13076.1 nucleotide diphosphate kinases 1 [Cucurbita maxima]2.7e-57100Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

KAG7028472.1 hypothetical protein SDJN02_09653, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-57100Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

XP_008437761.1 PREDICTED: nucleoside diphosphate kinase [Cucumis melo]3.0e-5698.2Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

XP_022935681.1 nucleoside diphosphate kinase [Cucurbita moschata]2.7e-57100Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

XP_038897694.1 nucleoside diphosphate kinase [Benincasa hispida]8.8e-5698.2Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPV 
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

TrEMBL top hitse value%identityAlignment
A0A1S3AVC6 Nucleoside diphosphate kinase1.5e-5698.2Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

A0A5A7TZ01 Nucleoside diphosphate kinase1.5e-5698.2Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

A0A6J1F5E1 Nucleoside diphosphate kinase1.3e-57100Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

A0A6J1IFQ6 Nucleoside diphosphate kinase1.3e-57100Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

L7S218 Nucleoside diphosphate kinase1.3e-57100Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

SwissProt top hitse value%identityAlignment
O81372 Nucleoside diphosphate kinase 16.3e-4979.28Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        ++VDR FAE HY+DL+ KPFFNGL+EYI+SGPVVAM+WEGK VV TGRKIIGAT P  S+ GTIRGDFAID+GRN+IHGSD+VESA KEIALWF EG VN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSSLHSWIYE
Subjt:  WQSSLHSWIYE

P39207 Nucleoside diphosphate kinase 13.7e-4978.38Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        +SV+R+FAE HY DL+ K FF+GL++YI+SGPVVAMIWEGKNVV TGRKIIGAT PA S+ GTIRGDFAID+GRN+IHGSDSVESARKEIALWF +GPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSS+H W+YE
Subjt:  WQSSLHSWIYE

P47920 Nucleoside diphosphate kinase B2.2e-4979.28Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        ++VD+AFAE HY+DL+ KPFFNGL+EYIISGPVVAM+WEGKNVV TGRKIIGAT PA+S  GTIRGDFAID+GRN+IHGSD+VESA+KEIALWF EG  N
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        W SSLH WIYE
Subjt:  WQSSLHSWIYE

P47922 Nucleoside diphosphate kinase 12.2e-4979.28Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        ++V+RAFAE HY+DL+ KPFF+GL++YIISGPVVAMIWEGKNVV TGRKIIGAT PA S+ GTIRGDFAID+GRN+IHGSD+VESA KEIALWF EG  N
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        W+SSLHSWIYE
Subjt:  WQSSLHSWIYE

Q96559 Nucleoside diphosphate kinase4.8e-4978.38Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        ++VD+AFAE HY+DL+ KPFFNGL+EYIISGPVVAM+WEGKNVV TGRKIIGAT PA+S  GTIRGDFAID+GRN+IHGSD+VESA+KEI LWF EG  N
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        W SSLH WIYE
Subjt:  WQSSLHSWIYE

Arabidopsis top hitse value%identityAlignment
AT4G09320.1 Nucleoside diphosphate kinase family protein2.6e-5078.38Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN
        +SV+R+FAE HY DL+ K FF+GL++YI+SGPVVAMIWEGKNVV TGRKIIGAT PA S+ GTIRGDFAID+GRN+IHGSDSVESARKEIALWF +GPVN
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVN

Query:  WQSSLHSWIYE
        WQSS+H W+YE
Subjt:  WQSSLHSWIYE

AT4G11010.1 nucleoside diphosphate kinase 34.7e-3156.19Show/hide
Query:  FAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPVNWQSSL
        FA+ HY DL  +PFFNGL +++ SGPV+AM+WEG  V+  GRK+IGAT P  S+ GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF  +  V++ S+ 
Subjt:  FAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPVNWQSSL

Query:  HSWIY
          W+Y
Subjt:  HSWIY

AT4G23895.3 Pleckstrin homology (PH) domain-containing protein3.2e-3256.76Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPV
        M   + FA+ HY DL  +PFFNGL  ++ SGPVVAM+WEG+ V+  GRK+IGAT P  S+ GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF  E  V
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPV

Query:  NWQSSLHSWIY
        ++ S+   WIY
Subjt:  NWQSSLHSWIY

AT4G23900.1 Nucleoside diphosphate kinase family protein3.2e-3256.76Show/hide
Query:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPV
        M   + FA+ HY DL  +PFFNGL  ++ SGPVVAM+WEG+ V+  GRK+IGAT P  S+ GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF  E  V
Subjt:  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPV

Query:  NWQSSLHSWIY
        ++ S+   WIY
Subjt:  NWQSSLHSWIY

AT5G63310.1 nucleoside diphosphate kinase 29.4e-3256.48Show/hide
Query:  RAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPV-NWQS
        +  AE HY DL+ K FF  LIEYI SGPVV M WEG  VVA+ RK+IG T P  ++ GTIRGD A+  GRNI+HGSDS E+ ++EI LWF EG +  W S
Subjt:  RAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPV-NWQS

Query:  SLHSWIYE
        +L +W+ E
Subjt:  SLHSWIYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCAGATCTTGCTGGAAAGCCTTTCTTCAATGGTTTGATCGAGTACATCATTTCCGGCCCAGTCGTTGCCATGAT
CTGGGAGGGGAAGAATGTTGTTGCAACCGGTAGGAAGATCATTGGAGCCACCAAGCCAGCAGATTCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCA
GGAACATCATTCATGGAAGCGATTCCGTCGAAAGTGCGAGGAAGGAAATTGCTCTGTGGTTCTCGGAGGGCCCTGTTAACTGGCAGAGCAGCCTTCATTCTTGGATCTAC
GAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCAGATCTTGCTGGAAAGCCTTTCTTCAATGGTTTGATCGAGTACATCATTTCCGGCCCAGTCGTTGCCATGAT
CTGGGAGGGGAAGAATGTTGTTGCAACCGGTAGGAAGATCATTGGAGCCACCAAGCCAGCAGATTCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCA
GGAACATCATTCATGGAAGCGATTCCGTCGAAAGTGCGAGGAAGGAAATTGCTCTGTGGTTCTCGGAGGGCCCTGTTAACTGGCAGAGCAGCCTTCATTCTTGGATCTAC
GAGTGA
Protein sequenceShow/hide protein sequence
MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIY
E