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Carg25066 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25066
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNucleoside diphosphate kinase family protein
Genome locationCarg_Chr06:6015124..6015598
RNA-Seq ExpressionCarg25066
SyntenyCarg25066
Gene Ontology termsGO:0006165 - nucleoside diphosphate phosphorylation (biological process)
GO:0006183 - GTP biosynthetic process (biological process)
GO:0006228 - UTP biosynthetic process (biological process)
GO:0006241 - CTP biosynthetic process (biological process)
GO:0004550 - nucleoside diphosphate kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR034907 - Nucleoside diphosphate kinase-like domain
IPR036850 - Nucleoside diphosphate kinase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC13076.1 nucleotide diphosphate kinases 1 [Cucurbita maxima]5.3e-0997.14Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        ME SFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

KAG7028471.1 Nucleoside diphosphate kinase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-22100Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGYPFLALRLIIFGAEFGSSPT
        MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGYPFLALRLIIFGAEFGSSPT
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGYPFLALRLIIFGAEFGSSPT

XP_004306978.1 PREDICTED: nucleoside diphosphate kinase 1 [Fragaria vesca subsp. vesca]5.3e-0989.19Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY
        MEQ+FIMIKPDGVQRGLVGEIISRFEKKGF+LKGL +
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY

XP_022152788.1 nucleoside diphosphate kinase [Momordica charantia]2.4e-0991.89Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY
        MEQSFIMIKPDGVQRGLVGEIISRFEKKGF+LKGL +
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY

XP_022935681.1 nucleoside diphosphate kinase [Cucurbita moschata]1.4e-09100Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

TrEMBL top hitse value%identityAlignment
A0A6J1DFU3 Nucleoside diphosphate kinase1.2e-0991.89Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY
        MEQSFIMIKPDGVQRGLVGEIISRFEKKGF+LKGL +
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY

A0A6J1F5E1 Nucleoside diphosphate kinase6.7e-10100Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

A0A6J1IFQ6 Nucleoside diphosphate kinase6.7e-10100Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

F4YFB4 Nucleoside diphosphate kinase3.3e-0994.29Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQ+FIMIKPDGVQRGLVGEIISRFEKKGF+LKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

L7S218 Nucleoside diphosphate kinase2.6e-0997.14Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        ME SFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

SwissProt top hitse value%identityAlignment
O81372 Nucleoside diphosphate kinase 13.4e-1186.49Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY
        MEQ+FIMIKPDGVQRGLVGEIISRFEKKGF+LK L +
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY

Q02254 Nucleoside diphosphate kinase 13.4e-1186.49Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY
        MEQ+FIMIKPDGVQRGLVGEIISRFEKKGF+LK L +
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGY

Q56E62 Nucleoside diphosphate kinase 12.6e-1191.43Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQ+FIMIKPDGVQRGLVGEII RFEKKGF+LKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

Q96559 Nucleoside diphosphate kinase3.4e-1191.43Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQ+FIMIKPDGVQRGLVGEII RFEKKGF LKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

Q9M7P6 Nucleoside diphosphate kinase2.6e-1191.43Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQ+FIMIKPDGVQRGLVGEII RFEKKGF+LKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

Arabidopsis top hitse value%identityAlignment
AT4G09320.1 Nucleoside diphosphate kinase family protein5.5e-1285.71Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        MEQ+FIMIKPDGVQRGL+GE+I RFEKKGF LKGL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

AT4G11010.1 nucleoside diphosphate kinase 32.5e-0974.29Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        ME++FI IKPDGVQRGL+ EIISRFE+KGF L G+
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

AT4G23895.3 Pleckstrin homology (PH) domain-containing protein1.3e-0868.57Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        ME++FI IKPDGVQRGL+ EII+RFE+KG+ L G+
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

AT4G23900.1 Nucleoside diphosphate kinase family protein1.3e-0868.57Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        ME++FI IKPDGVQRGL+ EII+RFE+KG+ L G+
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL

AT5G63310.1 nucleoside diphosphate kinase 22.3e-1077.14Show/hide
Query:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL
        +E+++IM+KPDG+QRGLVGEIISRFEKKGF L GL
Subjt:  MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGACTGGTTGGAGAGATTATCAGCAGGTTTGAGAAGAAGGGCTTTGCTCTTAAAGGTTTGGGTTA
TCCCTTTCTTGCTTTGCGTTTGATAATATTTGGAGCAGAGTTCGGCTCTTCACCGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGACTGGTTGGAGAGATTATCAGCAGGTTTGAGAAGAAGGGCTTTGCTCTTAAAGGTTTGGGTTA
TCCCTTTCTTGCTTTGCGTTTGATAATATTTGGAGCAGAGTTCGGCTCTTCACCGACTTGA
Protein sequenceShow/hide protein sequence
MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLGYPFLALRLIIFGAEFGSSPT