; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L37a
Genome locationCarg_Chr19:4210678..4211082
RNA-Seq ExpressionCarg25075
SyntenyCarg25075
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011480.1 60S ribosomal protein L37a-2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-39100Show/hide
Query:  MEVSQHSKYFCEFCGKAIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGKAIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGKAIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
MBA0680301.1 hypothetical protein [Gossypium aridum]1.6e-2275.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
PHU08411.1 60S ribosomal protein L37a [Capsicum chinense]1.6e-2275.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
RXI00911.1 hypothetical protein DVH24_001145 [Malus domestica]1.6e-2275.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
TMW95992.1 hypothetical protein EJD97_008077 [Solanum chilense]1.6e-2275.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
TrEMBL top hitse value%identityAlignment
A0A1U7XSD1 60S ribosomal protein L37a7.7e-2375.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
A0A1U8IV94 60S ribosomal protein L37a isoform X17.7e-2375.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
A0A1U8LTA9 60S ribosomal protein L37a7.7e-2375.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
A0A6J1ICH2 60S ribosomal protein L37a7.7e-2375.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
K4CND1 Uncharacterized protein7.7e-2375.61Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-17.9e-2573.17Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYT+N                  TASAVTVRSTIRRLREQTE+
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
P0DKK2 60S ribosomal protein L37a-27.9e-2573.17Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYT+N                  TASAVTVRSTIRRLREQTE+
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
Q9SRK6 Putative 60S ribosomal protein L37a-15.1e-2470.73Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQH+KYFCEFCGK ++KRK VGIWGCKDCGKVKAGGAYT+N                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
Q9XHE4 60S ribosomal protein L37a1.8e-2474.39Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQHSKYFCEFCGK A+KRKAVGIWGCK CGKVKAGGAYTLN                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
Q9ZRS8 60S ribosomal protein L37a6.7e-2472.84Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTE
        MEVSQHSK+FCEFCGK A+KRKAVGIWGCKDCGKVKAGGAYTLN                  T SAVTVRSTIRRLREQTE
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTE
Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein3.6e-2570.73Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
        MEVSQH+KYFCEFCGK ++KRK VGIWGCKDCGKVKAGGAYT+N                  TASAVTVRSTIRRLREQTES
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
AT3G60245.1 Zinc-binding ribosomal protein family protein1.1e-2471.6Show/hide
Query:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTE
        MEVSQHSKYFCEFCGK  +KRKAVGIWGCKDCGKVKAGGAYT+N                  TASAVTVRSTIRRLREQ E
Subjt:  MEVSQHSKYFCEFCGK-AIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGAAAGGCAATTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGG
AGGTGCCTACACTCTTAATTTTTGTTGTTTAAATGTATTTGATTTTAATGTTATTTTTGGTACCTTTGACAGCACTGCTAGTGCTGTGACAGTGAGGAGCACTATTAGGA
GGCTGAGAGAGCAAACTGAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGAAAGGCAATTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGG
AGGTGCCTACACTCTTAATTTTTGTTGTTTAAATGTATTTGATTTTAATGTTATTTTTGGTACCTTTGACAGCACTGCTAGTGCTGTGACAGTGAGGAGCACTATTAGGA
GGCTGAGAGAGCAAACTGAAAGCTAA
Protein sequenceShow/hide protein sequence
MEVSQHSKYFCEFCGKAIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES