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Carg25081 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25081
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGATA transcription factor, putative
Genome locationCarg_Chr19:4335425..4336167
RNA-Seq ExpressionCarg25081
SyntenyCarg25081
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type
IPR044589 - GATA transcription factor 26/27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571785.1 GATA transcription factor 26, partial [Cucurbita argyrosperma subsp. sororia]1.6e-64100Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGSAISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

KAG7011486.1 GATA transcription factor 26, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-93100Show/hide
Query:  MLANIYGSQATRARRWRRSVIHHIDHYYGLPHVILVFSNLPATSLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSI
        MLANIYGSQATRARRWRRSVIHHIDHYYGLPHVILVFSNLPATSLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSI
Subjt:  MLANIYGSQATRARRWRRSVIHHIDHYYGLPHVILVFSNLPATSLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSI

Query:  SINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTG
        SINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTG
Subjt:  SINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTG

XP_022931794.1 GATA transcription factor 26-like [Cucurbita moschata]2.3e-6398.39Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSI W LPDQGQDYHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGSAISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

XP_022971837.1 GATA transcription factor 26-like [Cucurbita maxima]4.6e-6499.19Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGS ISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

XP_023554174.1 GATA transcription factor 26-like [Cucurbita pepo subsp. pepo]7.9e-6499.19Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAW LPDQGQDYHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGSAISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

TrEMBL top hitse value%identityAlignment
A0A0A0LEK2 GATA-type domain-containing protein1.5e-6093.55Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDHR SR+KSISINKNKEVKLLKRKLQQADGSI WM+PDQGQ YHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGSAISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

A0A1S3CQA3 GATA transcription factor 26-like2.8e-5991.13Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDH+ SR+KSIS+NKNKEVKLLKRKLQQADGS  WM+PDQGQ YHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGSAISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

A0A5A7T573 GATA transcription factor 26-like7.4e-6090.55Show/hide
Query:  SLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSN
        SL TPLWRNGPPDKPVLCNACGSRWRTKGTL NYTPLHAR  PDEYEDH+ SR+KSIS+NKNKEVKLLKRKLQQADGS  WM+PDQGQ YHRVVDEDTSN
Subjt:  SLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSN

Query:  RSSSGSAISNPESCAHFSSADASDLTG
        RSSSGSAISNPESCAHFSSADASDLTG
Subjt:  RSSSGSAISNPESCAHFSSADASDLTG

A0A6J1EV83 GATA transcription factor 26-like1.1e-6398.39Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSI W LPDQGQDYHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGSAISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

A0A6J1I322 GATA transcription factor 26-like2.2e-6499.19Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
        TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSS

Query:  SGSAISNPESCAHFSSADASDLTG
        SGS ISNPESCAHFSSADASDLTG
Subjt:  SGSAISNPESCAHFSSADASDLTG

SwissProt top hitse value%identityAlignment
Q550D5 Transcription factor stalky7.3e-0462.07Show/hide
Query:  SLYTPLWRNGPPDKPVLCNACGSRWRTKG
        S  TP WR GP  K  LCNACG +WR KG
Subjt:  SLYTPLWRNGPPDKPVLCNACGSRWRTKG

Q5PP38 GATA transcription factor 273.0e-2654.4Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPD--EYEDHRASRV--KSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHR-VVDEDT
        TPLWRNGPP+KPVLCNACGSRWRTKG+L NYTPLHAR   D  E EDHR   V  K +S+NK    K+ KRK  Q + ++     +    + R  +DE+ 
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPD--EYEDHRASRV--KSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHR-VVDEDT

Query:  SNRSSSGSAISNPESCAHFSSADAS
        SNRSSSGS +SN ESCA  ++ D++
Subjt:  SNRSSSGSAISNPESCAHFSSADAS

Q8GXL7 GATA transcription factor 241.5e-0432.47Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIA
        TP+ R GP     LCNACG  W  KGTL +     ++  P +   H       +S+NKN++  L   ++ +  G I+
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIA

Q8W4H1 GATA transcription factor 261.0e-3465.85Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSN
        TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR   DE +D HR  R+KSIS+ NKNKE+K+LKRK  Q +  I   + +        V++ED SN
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSN

Query:  RSSSGSAISNPESCAHFSSADAS
        RSSSGSA+SN ESCA FSSAD S
Subjt:  RSSSGSAISNPESCAHFSSADAS

Q9M1U2 GATA transcription factor 147.3e-0457.58Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTP
        TPLWR GP     LCNACG R+RT   L  Y P
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTP

Arabidopsis top hitse value%identityAlignment
AT3G21175.1 ZIM-like 11.0e-0532.47Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIA
        TP+ R GP     LCNACG  W  KGTL +     ++  P +   H       +S+NKN++  L   ++ +  G I+
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKLLKRKLQQADGSIA

AT4G17570.1 GATA transcription factor 267.4e-3665.85Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSN
        TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR   DE +D HR  R+KSIS+ NKNKE+K+LKRK  Q +  I   + +        V++ED SN
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSN

Query:  RSSSGSAISNPESCAHFSSADAS
        RSSSGSA+SN ESCA FSSAD S
Subjt:  RSSSGSAISNPESCAHFSSADAS

AT4G17570.2 GATA transcription factor 261.2e-3866.41Show/hide
Query:  YTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTS
        YTPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR   DE +D HR  R+KSIS+ NKNKE+K+LKRK  Q +  I   + +        V++ED S
Subjt:  YTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTS

Query:  NRSSSGSAISNPESCAHFSSADASDLTG
        NRSSSGSA+SN ESCA FSSAD S+LTG
Subjt:  NRSSSGSAISNPESCAHFSSADASDLTG

AT4G17570.3 GATA transcription factor 266.0e-3866.14Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSN
        TPLWRNGPP+KPVLCNACGSRWRTKGTL NYTPLHAR   DE +D HR  R+KSIS+ NKNKE+K+LKRK  Q +  I   + +        V++ED SN
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYED-HRASRVKSISI-NKNKEVKLLKRKLQQADGSIAWMLPDQGQDYH-RVVDEDTSN

Query:  RSSSGSAISNPESCAHFSSADASDLTG
        RSSSGSA+SN ESCA FSSAD S+LTG
Subjt:  RSSSGSAISNPESCAHFSSADASDLTG

AT5G47140.1 GATA transcription factor 272.2e-2754.4Show/hide
Query:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPD--EYEDHRASRV--KSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHR-VVDEDT
        TPLWRNGPP+KPVLCNACGSRWRTKG+L NYTPLHAR   D  E EDHR   V  K +S+NK    K+ KRK  Q + ++     +    + R  +DE+ 
Subjt:  TPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPD--EYEDHRASRV--KSISINKNKEVKLLKRKLQQADGSIAWMLPDQGQDYHR-VVDEDT

Query:  SNRSSSGSAISNPESCAHFSSADAS
        SNRSSSGS +SN ESCA  ++ D++
Subjt:  SNRSSSGSAISNPESCAHFSSADAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGCCAATATTTATGGTTCTCAAGCGACCCGGGCGCGTCGATGGAGAAGAAGTGTTATTCATCACATTGATCACTACTATGGCTTACCTCATGTCATATTGGTCTT
CAGTAATTTGCCTGCAACGTCTCTATACACTCCTCTTTGGCGTAATGGACCTCCCGACAAACCGGTGTTATGCAATGCGTGTGGATCCCGATGGAGGACGAAAGGAACAC
TCACAAACTATACCCCGTTGCATGCTCGGACTGTTCCTGATGAATATGAAGATCACAGGGCTTCCAGGGTGAAGAGCATTTCAATAAATAAAAATAAAGAAGTAAAACTG
CTGAAACGAAAGCTACAACAAGCCGATGGATCGATTGCGTGGATGCTTCCCGATCAAGGTCAGGATTACCATAGAGTAGTGGATGAAGACACAAGCAATAGGTCGAGTTC
TGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGCCAATATTTATGGTTCTCAAGCGACCCGGGCGCGTCGATGGAGAAGAAGTGTTATTCATCACATTGATCACTACTATGGCTTACCTCATGTCATATTGGTCTT
CAGTAATTTGCCTGCAACGTCTCTATACACTCCTCTTTGGCGTAATGGACCTCCCGACAAACCGGTGTTATGCAATGCGTGTGGATCCCGATGGAGGACGAAAGGAACAC
TCACAAACTATACCCCGTTGCATGCTCGGACTGTTCCTGATGAATATGAAGATCACAGGGCTTCCAGGGTGAAGAGCATTTCAATAAATAAAAATAAAGAAGTAAAACTG
CTGAAACGAAAGCTACAACAAGCCGATGGATCGATTGCGTGGATGCTTCCCGATCAAGGTCAGGATTACCATAGAGTAGTGGATGAAGACACAAGCAATAGGTCGAGTTC
TGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTTAA
Protein sequenceShow/hide protein sequence
MLANIYGSQATRARRWRRSVIHHIDHYYGLPHVILVFSNLPATSLYTPLWRNGPPDKPVLCNACGSRWRTKGTLTNYTPLHARTVPDEYEDHRASRVKSISINKNKEVKL
LKRKLQQADGSIAWMLPDQGQDYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTG