CuGenDBv2

Gene ID	Carg25082
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	IIIB transcription factor
Genome location	Carg_Chr19:4347453..4349869
RNA-Seq Expression	Carg25082
Synteny	Carg25082
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7011487.1 hypothetical protein SDJN02_26393, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.9e-59

100

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQLFEKAEAGKFTNTL
        GEERSMKNMVKVMQQQLFEKAEAGKFTNTL
Subjt:  GEERSMKNMVKVMQQQLFEKAEAGKFTNTL

XP_022931799.1 uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata]

2.0e-51

95.24

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVP+QAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPI KEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQ-QQLFEKAEAGK
        GEERSMKNMVKVMQ Q LFEKAEAG+
Subjt:  GEERSMKNMVKVMQ-QQLFEKAEAGK

XP_022971855.1 uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima]

2.6e-51

95.2

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEAG
        GEER+MKNMVKVMQQQ LFE AEAG
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEAG

XP_022971856.1 uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima]

2.0e-51

94.44

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEAGK
        GEER+MKNMVKVMQQQ LFE AEAG+
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEAGK

XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]

1.8e-52

90.08

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDK+LEFGRRALFYVRVLSGYE+RRIRSFRLE++KRLKQAEERK AIRK+PEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEAGKFTNTL
        GEER+MK+MVKVMQQQ LFEKAEAGK T+TL
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEAGKFTNTL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BQI2 uncharacterized protein LOC111004517

1.1e-50

87.69

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDK+LEFGRRALFYVRVLSGYE+RRIRSFRLE++KRLKQAEE+K A+RK+PEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEAGKFTNT
        GEER MK+MVKVMQQQ LFEKAEAGK T +
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEAGKFTNT

A0A6J1EV87 uncharacterized protein LOC111438069 isoform X2

9.7e-52

95.24

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVP+QAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPI KEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQ-QQLFEKAEAGK
        GEERSMKNMVKVMQ Q LFEKAEAG+
Subjt:  GEERSMKNMVKVMQ-QQLFEKAEAGK

A0A6J1I338 uncharacterized protein LOC111470545 isoform X7

8.2e-51

95.16

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEA
        GEER+MKNMVKVMQQQ LFE AEA
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEA

A0A6J1I4C9 uncharacterized protein LOC111470545 isoform X6

9.7e-52

94.44

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEAGK
        GEER+MKNMVKVMQQQ LFE AEAG+
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEAGK

A0A6J1I6W6 uncharacterized protein LOC111470545 isoform X5

1.3e-51

95.2

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQ-LFEKAEAG
        GEER+MKNMVKVMQQQ LFE AEAG
Subjt:  GEERSMKNMVKVMQQQ-LFEKAEAG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17010.1 unknown protein

6.7e-37

61.48

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Query:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE
        M+K+LE+GR+A+FYVRVLSGYE+RRIRS+RL+++KR++QA +RKV I ++PEQ +L EVRRMVEEMQ LNK++E TE+ IE+YFKPIDK A T+M++QLE
Subjt:  MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLE

Query:  GEERSMKNMVKVMQQQLFEKAE
        GE+++M  M+   QQ+   K E
Subjt:  GEERSMKNMVKVMQQQLFEKAE

Sequences

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CDS sequence

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ATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCT
CAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAG
AGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTT
AAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

mRNA sequence

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TTTGCGAAATTCAGTTTGTAAATGGGTTGTGAATTTCCCTTCGATTTGACCCACCTGAGTTACAGATCGGATCCTACTTGAGTTTGCAGGGAGGGATTTGGATGGACAAG
GTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGC
GGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAG
AGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATG
CAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

Protein sequence

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MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMV
KVMQQQLFEKAEAGKFTNTL

Carg25082 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome