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Carg25130 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25130
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:5497138..5498173
RNA-Seq ExpressionCarg25130
SyntenyCarg25130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583758.1 hypothetical protein SDJN03_19690, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7087.04Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAH-------------------GRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQC
        MGAHLCSFRRSGVGRPFTPPSSAH                   GRREIEACIEKKEMKKEYMSLEELLLASP APSERAFGNGGHGGFKRKVHPTRMSQC
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAH-------------------GRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQC

Query:  SSFCQRSGVVSESVAEDHENICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        SSFCQRSGVVSESVAEDHENICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAAD GIVAS
Subjt:  SSFCQRSGVVSESVAEDHENICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

KAG7019397.1 hypothetical protein SDJN02_18358, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-75100Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQCSSFCQRSGVVSESVAEDHE
        MGAHLCSFRRSGVGRPFTPPSSAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQCSSFCQRSGVVSESVAEDHE
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQCSSFCQRSGVVSESVAEDHE

Query:  NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
Subjt:  NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

XP_008458959.1 PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo]1.8e-2952.57Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHG-------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP
        MGA+LC+ R     RP T  +S  G                   +RE+EA IEKKE  KE+MSLEELLLASP APSER  GN G      HGGFKRKVHP
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHG-------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP

Query:  TRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
         R+ + SS C +RSG V ESVA+D  +      ICR ++GKL+KKVSFRLPEVSDVI+I S E D  AD   V S
Subjt:  TRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

XP_022142601.1 uncharacterized protein LOC111012677 [Momordica charantia]9.9e-3655.43Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHGR-------------------REIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP
        MGA+LCSFR S V  P T   S  GR                   RE EA IEK+E K+EY+SLEELLLASP   SE+ FGNGG      HGGFKRKVHP
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHGR-------------------REIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP

Query:  TRMSQCSSFCQRS-GVVSESVAEDHE------NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        TR+   SS C+RS G V ESVA+  E      +ICR ++GKL+KKVSFRLPEVS+VI+IYSPE  A+AD   VAS
Subjt:  TRMSQCSSFCQRS-GVVSESVAEDHE------NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

XP_023519070.1 uncharacterized protein LOC111782536 [Cucurbita pepo subsp. pepo]1.3e-6481.48Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPS-------------------SAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQC
        MGAHLCSFRR GV RPFTP S                      GRRE+E  IEKKEMKKEYMSLEELLLASP APSERAFGNGGHGGFKRKVHPTRMSQC
Subjt:  MGAHLCSFRRSGVGRPFTPPS-------------------SAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQC

Query:  SSFCQRSGVVSESVAEDHENICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        SSFC+RSGVVSESVAEDHENICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
Subjt:  SSFCQRSGVVSESVAEDHENICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

TrEMBL top hitse value%identityAlignment
A0A1S3C9M5 uncharacterized protein LOC103498217 isoform X23.3e-2951.11Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHG------------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFK
        MGA+LC+ R     RP T  +S  G                        +RE+EA IEKKE  KE+MSLEELLLASP APSER  GN G      HGGFK
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHG------------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFK

Query:  RKVHPTRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        RKVHP R+ + SS C +RSG V ESVA+D  +      ICR ++GKL+KKVSFRLPEVSDVI+I S E D  AD   V S
Subjt:  RKVHPTRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

A0A1S3CAA9 uncharacterized protein LOC103498217 isoform X38.8e-3052.57Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHG-------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP
        MGA+LC+ R     RP T  +S  G                   +RE+EA IEKKE  KE+MSLEELLLASP APSER  GN G      HGGFKRKVHP
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHG-------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP

Query:  TRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
         R+ + SS C +RSG V ESVA+D  +      ICR ++GKL+KKVSFRLPEVSDVI+I S E D  AD   V S
Subjt:  TRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

A0A5A7ULA6 Uncharacterized protein9.7e-2955.48Show/hide
Query:  GAHLCSFRRSGVGRPFTPPSSAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHPTRMSQCSSFC-QRSGVVSES
        G  +C +RR    R +        +RE+EA IEKKE  KE+MSLEELLLASP APSER  GN G      HGGFKRKVHP R+ + SS C +RSG V ES
Subjt:  GAHLCSFRRSGVGRPFTPPSSAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHPTRMSQCSSFC-QRSGVVSES

Query:  VAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        VA+D  +      ICR ++GKL+KKVSFRLPEVSDVI+I S E D  AD   V S
Subjt:  VAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

A0A5D3CKA0 Uncharacterized protein8.8e-3052.57Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHG-------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP
        MGA+LC+ R     RP T  +S  G                   +RE+EA IEKKE  KE+MSLEELLLASP APSER  GN G      HGGFKRKVHP
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHG-------------------RREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP

Query:  TRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
         R+ + SS C +RSG V ESVA+D  +      ICR ++GKL+KKVSFRLPEVSDVI+I S E D  AD   V S
Subjt:  TRMSQCSSFC-QRSGVVSESVAEDHEN------ICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

A0A6J1CMN8 uncharacterized protein LOC1110126774.8e-3655.43Show/hide
Query:  MGAHLCSFRRSGVGRPFTPPSSAHGR-------------------REIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP
        MGA+LCSFR S V  P T   S  GR                   RE EA IEK+E K+EY+SLEELLLASP   SE+ FGNGG      HGGFKRKVHP
Subjt:  MGAHLCSFRRSGVGRPFTPPSSAHGR-------------------REIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGG------HGGFKRKVHP

Query:  TRMSQCSSFCQRS-GVVSESVAEDHE------NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS
        TR+   SS C+RS G V ESVA+  E      +ICR ++GKL+KKVSFRLPEVS+VI+IYSPE  A+AD   VAS
Subjt:  TRMSQCSSFCQRS-GVVSESVAEDHE------NICRPQTGKLRKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCCATCTCTGCAGCTTTCGGCGCTCCGGTGTCGGTAGACCGTTCACGCCACCCTCCTCCGCTCACGGGCGGAGAGAGATAGAGGCATGTATTGAGAAGAAAGA
AATGAAGAAGGAGTATATGTCTTTGGAGGAGTTGCTGTTGGCTTCTCCGGCAGCGCCATCGGAGCGAGCTTTTGGAAATGGCGGCCATGGCGGATTCAAGAGAAAAGTGC
ATCCGACCAGGATGTCGCAGTGTTCCTCGTTTTGTCAGAGATCCGGTGTGGTTAGTGAATCAGTTGCAGAGGATCATGAGAACATTTGCAGACCCCAAACTGGTAAATTG
AGGAAGAAAGTAAGCTTTAGGCTGCCGGAGGTGTCGGACGTTATTTTAATTTACTCGCCGGAGGGTGATGCCGCGGCCGACGGCGGGATTGTTGCTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCCATCTCTGCAGCTTTCGGCGCTCCGGTGTCGGTAGACCGTTCACGCCACCCTCCTCCGCTCACGGGCGGAGAGAGATAGAGGCATGTATTGAGAAGAAAGA
AATGAAGAAGGAGTATATGTCTTTGGAGGAGTTGCTGTTGGCTTCTCCGGCAGCGCCATCGGAGCGAGCTTTTGGAAATGGCGGCCATGGCGGATTCAAGAGAAAAGTGC
ATCCGACCAGGATGTCGCAGTGTTCCTCGTTTTGTCAGAGATCCGGTGTGGTTAGTGAATCAGTTGCAGAGGATCATGAGAACATTTGCAGACCCCAAACTGGTAAATTG
AGGAAGAAAGTAAGCTTTAGGCTGCCGGAGGTGTCGGACGTTATTTTAATTTACTCGCCGGAGGGTGATGCCGCGGCCGACGGCGGGATTGTTGCTTCCTAG
Protein sequenceShow/hide protein sequence
MGAHLCSFRRSGVGRPFTPPSSAHGRREIEACIEKKEMKKEYMSLEELLLASPAAPSERAFGNGGHGGFKRKVHPTRMSQCSSFCQRSGVVSESVAEDHENICRPQTGKL
RKKVSFRLPEVSDVILIYSPEGDAAADGGIVAS