; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25175 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25175
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein transport protein sec16
Genome locationCarg_Chr06:4251105..4252268
RNA-Seq ExpressionCarg25175
SyntenyCarg25175
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0015031 - protein transport (biological process)
GO:0048208 - COPII vesicle coating (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0070971 - endoplasmic reticulum exit site (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596862.1 Protein transport protein SEC16B-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1969.05Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

KAG7028391.1 hypothetical protein SDJN02_09572, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-75100Show/hide
Query:  MFLANGGIQLFGEFSDQLSPPDLHHTIKPRGEHTSPVLSYGQDTMNDTVIFLFILHFNHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLG
        MFLANGGIQLFGEFSDQLSPPDLHHTIKPRGEHTSPVLSYGQDTMNDTVIFLFILHFNHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLG
Subjt:  MFLANGGIQLFGEFSDQLSPPDLHHTIKPRGEHTSPVLSYGQDTMNDTVIFLFILHFNHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLG

Query:  EALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        EALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
Subjt:  EALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

XP_022934299.1 protein transport protein SEC16B homolog isoform X1 [Cucurbita moschata]1.6e-1767.86Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN GGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

XP_022934313.1 protein transport protein SEC16B homolog isoform X2 [Cucurbita moschata]1.6e-1767.86Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN GGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

XP_022934322.1 protein transport protein SEC16B homolog isoform X3 [Cucurbita moschata]1.6e-1767.86Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN GGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

TrEMBL top hitse value%identityAlignment
A0A6J1F269 Protein transport protein sec167.6e-1867.86Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN GGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

A0A6J1F2E2 Protein transport protein sec167.6e-1867.86Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN GGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

A0A6J1F7B4 Protein transport protein sec167.6e-1867.86Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN GGGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

A0A6J1KUF4 Protein transport protein sec163.8e-1766.67Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN  GGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

A0A6J1L1N8 Protein transport protein sec163.8e-1766.67Show/hide
Query:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL
        N +GN  L   S R      AN    +   S  RKP G KPLGEALGIPPSSFMPSEPPPSVHTLMN  GGGGGMGDDLHEVEL
Subjt:  NHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGGCTAATGGAGGGATTCAGCTATTTGGTGAATTTTCAGATCAGTTATCGCCTCCTGATCTCCATCATACAATTAAGCCAAGAGGTGAACATACAAGTCCCGT
TCTCAGTTATGGACAGGACACCATGAACGATACCGTGATATTTCTTTTCATTCTTCACTTTAATCACAATGGGAATGCAGCTTTGTCAAGGTACTCCATGCGCATCAATG
TGAAAGTGGCTGCCAATCCCCATTCAGTGATGGCCGAAGGTAGCCTAGCTCGTAAACCACACGGCACTAAACCTTTAGGTGAAGCATTGGGCATACCCCCATCATCTTTT
ATGCCGAGTGAACCACCACCCTCGGTGCACACGCTGATGAATGGTGGTGGTGGTGGTGGTGGCATGGGAGATGACCTCCATGAGGTGGAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTGGCTAATGGAGGGATTCAGCTATTTGGTGAATTTTCAGATCAGTTATCGCCTCCTGATCTCCATCATACAATTAAGCCAAGAGGTGAACATACAAGTCCCGT
TCTCAGTTATGGACAGGACACCATGAACGATACCGTGATATTTCTTTTCATTCTTCACTTTAATCACAATGGGAATGCAGCTTTGTCAAGGTACTCCATGCGCATCAATG
TGAAAGTGGCTGCCAATCCCCATTCAGTGATGGCCGAAGGTAGCCTAGCTCGTAAACCACACGGCACTAAACCTTTAGGTGAAGCATTGGGCATACCCCCATCATCTTTT
ATGCCGAGTGAACCACCACCCTCGGTGCACACGCTGATGAATGGTGGTGGTGGTGGTGGTGGCATGGGAGATGACCTCCATGAGGTGGAACTTTAA
Protein sequenceShow/hide protein sequence
MFLANGGIQLFGEFSDQLSPPDLHHTIKPRGEHTSPVLSYGQDTMNDTVIFLFILHFNHNGNAALSRYSMRINVKVAANPHSVMAEGSLARKPHGTKPLGEALGIPPSSF
MPSEPPPSVHTLMNGGGGGGGMGDDLHEVEL