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Carg25232 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25232
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description4-hydroxy-4-methyl-2-oxoglutarate aldolase
Genome locationCarg_Chr16:7884937..7886299
RNA-Seq ExpressionCarg25232
SyntenyCarg25232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596786.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0571.43Show/hide
Query:  EGMAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        E MAAPATA++CD NA H+TSG LRVLQ  F+IYG
Subjt:  EGMAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

KAG7015603.1 hypothetical protein SDJN02_23239, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-26100Show/hide
Query:  MVWLKFTNALFLIVRFDEWEGMAAPATAEVCDTNAGHITSGGLRVLQASFEIYGTDSDGE
        MVWLKFTNALFLIVRFDEWEGMAAPATAEVCDTNAGHITSGGLRVLQASFEIYGTDSDGE
Subjt:  MVWLKFTNALFLIVRFDEWEGMAAPATAEVCDTNAGHITSGGLRVLQASFEIYGTDSDGE

XP_004148273.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus]5.0e-0575.76Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA+VCD NA H+T+G LRVLQ  FEIYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

XP_008448991.1 PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo]5.0e-0575.76Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA+VCD NA H+T+G LRVLQ  FEIYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

XP_023540534.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo]8.5e-0572.73Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA++CD NA H+TSG LRVLQ  F+IYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

TrEMBL top hitse value%identityAlignment
A0A0A0L5X9 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.4e-0575.76Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA+VCD NA H+T+G LRVLQ  FEIYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

A0A1S3BKF1 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.4e-0575.76Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA+VCD NA H+T+G LRVLQ  FEIYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

A0A5D3D743 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.4e-0575.76Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA+VCD NA H+T+G LRVLQ  FEIYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

A0A6J1CPD0 4-hydroxy-4-methyl-2-oxoglutarate aldolase1.2e-0469.7Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MA+PATA++CD NA H+ SG LRVLQ+ FEIYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

A0A6J1GE55 4-hydroxy-4-methyl-2-oxoglutarate aldolase5.4e-0569.7Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAAPATA++CD NA H+TSG LRVLQ  F++YG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02770.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase7.7e-0460.61Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MA   TAEVCD N   I SG LR LQ  F+IYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase1.0e-0360.61Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MA   TAEVCD N   I SG LR LQ  F+IYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

AT5G16450.2 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase1.0e-0360.61Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MA   TAEVCD N   I SG LR LQ  F+IYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG

AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase3.4e-0460.61Show/hide
Query:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG
        MAA ATAE CD+NA  I++G LR L   F+IYG
Subjt:  MAAPATAEVCDTNAGHITSGGLRVLQASFEIYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGGCTTAAATTCACCAACGCGCTGTTTTTGATTGTTCGATTCGACGAGTGGGAAGGCATGGCAGCACCAGCAACAGCAGAAGTTTGTGATACAAATGCAGGACA
TATCACAAGCGGAGGTCTCCGAGTACTGCAAGCGTCATTCGAGATTTACGGGACGGATAGTGACGGTGAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGGCTTAAATTCACCAACGCGCTGTTTTTGATTGTTCGATTCGACGAGTGGGAAGGCATGGCAGCACCAGCAACAGCAGAAGTTTGTGATACAAATGCAGGACA
TATCACAAGCGGAGGTCTCCGAGTACTGCAAGCGTCATTCGAGATTTACGGGACGGATAGTGACGGTGAA
Protein sequenceShow/hide protein sequence
MVWLKFTNALFLIVRFDEWEGMAAPATAEVCDTNAGHITSGGLRVLQASFEIYGTDSDGE