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Carg25240 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25240
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationCarg_Chr04:16824058..16824339
RNA-Seq ExpressionCarg25240
SyntenyCarg25240
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4298.92Show/hide
Query:  MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTS AAAAAVYTDDKRLIHTGPNPLHN
Subjt:  MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1762.24Show/hide
Query:  MTLTTHASAATTAYAFLLFFWVLLIFPP--PTLCLHLPPPPPTSRKLVHFSTASLSH---ATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        +T + H + ATT  A +LF WVLLI  P   TLC  LPP P   RKLV FSTAS  H   ATSP ELLH R +SA AAAA Y D+KRLIHTGPNPLHN
Subjt:  MTLTTHASAATTAYAFLLFFWVLLIFPP--PTLCLHLPPPPPTSRKLVHFSTASLSH---ATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
KAG7032578.1 hypothetical protein SDJN02_06627, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-44100Show/hide
Query:  MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
Subjt:  MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]1.6e-1861.86Show/hide
Query:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        T + H +  TT  A LLFFWVLLI  P TLCLHLPPPPP SRKL  FSTAS  HA     TSP ELL  R  ++A     Y +DKRLIHTGPNPLHN
Subjt:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]6.7e-1759.79Show/hide
Query:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        T + H    TT  A  LFFWVLLI  P TLCLHLPPPPP SRKL  FSTA   HA     TSP EL       +AA AA Y ++KRLIHTGPNPLHN
Subjt:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein3.3e-1759.79Show/hide
Query:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        T + H    TT  A  LFFWVLLI  P TLCLHLPPPPP SRKL  FSTA   HA     TSP EL       +AA AA Y ++KRLIHTGPNPLHN
Subjt:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like7.7e-1961.86Show/hide
Query:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        T + H +  TT  A LLFFWVLLI  P TLCLHLPPPPP SRKL  FSTAS  HA     TSP ELL  R  ++A     Y +DKRLIHTGPNPLHN
Subjt:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like7.7e-1961.86Show/hide
Query:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        T + H +  TT  A LLFFWVLLI  P TLCLHLPPPPP SRKL  FSTAS  HA     TSP ELL  R  ++A     Y +DKRLIHTGPNPLHN
Subjt:  TLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHA-----TSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 175.2e-0437.08Show/hide
Query:  FLLFFWVLLIFPPPTLC---------LHL--PPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        F LFF+V  +     L          LHL   PPPP  RK + +STA      S  +              +Y DDKR++HTGPNPLHN
Subjt:  FLLFFWVLLIFPPPTLC---------LHL--PPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 173.7e-0537.08Show/hide
Query:  FLLFFWVLLIFPPPTLC---------LHL--PPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        F LFF+V  +     L          LHL   PPPP  RK + +STA      S  +              +Y DDKR++HTGPNPLHN
Subjt:  FLLFFWVLLIFPPPTLC---------LHL--PPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
AT1G70895.2 CLAVATA3/ESR-RELATED 173.7e-0537.08Show/hide
Query:  FLLFFWVLLIFPPPTLC---------LHL--PPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN
        F LFF+V  +     L          LHL   PPPP  RK + +STA      S  +              +Y DDKR++HTGPNPLHN
Subjt:  FLLFFWVLLIFPPPTLC---------LHL--PPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTCACAACCCACGCCTCAGCAGCCACCACCGCATACGCGTTTCTCCTCTTCTTCTGGGTCCTCCTCATTTTTCCTCCGCCTACTCTCTGTCTTCATCTACCACC
ACCGCCCCCGACGTCAAGGAAACTAGTCCACTTCTCCACGGCGTCCTTATCACATGCAACTTCCCCACCTGAGCTCCTCCACCACCGTCCTACCTCAGCCGCTGCTGCCG
CCGCCGTTTACACCGACGACAAGCGGTTAATCCACACGGGTCCGAATCCTCTTCACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACTCACAACCCACGCCTCAGCAGCCACCACCGCATACGCGTTTCTCCTCTTCTTCTGGGTCCTCCTCATTTTTCCTCCGCCTACTCTCTGTCTTCATCTACCACC
ACCGCCCCCGACGTCAAGGAAACTAGTCCACTTCTCCACGGCGTCCTTATCACATGCAACTTCCCCACCTGAGCTCCTCCACCACCGTCCTACCTCAGCCGCTGCTGCCG
CCGCCGTTTACACCGACGACAAGCGGTTAATCCACACGGGTCCGAATCCTCTTCACAACTAA
Protein sequenceShow/hide protein sequence
MTLTTHASAATTAYAFLLFFWVLLIFPPPTLCLHLPPPPPTSRKLVHFSTASLSHATSPPELLHHRPTSAAAAAAVYTDDKRLIHTGPNPLHN