; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg25243 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25243
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description10 kDa chaperonin-like
Genome locationCarg_Chr04:16836288..16837942
RNA-Seq ExpressionCarg25243
SyntenyCarg25243
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3432182.1 hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis]1.4e-4188.66Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MA+RLIP  NRVL+EKI+PPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GN++PV VKEGDTVLLPEYGGT VKLGEKEFHLFRDED+LGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
XP_022152333.1 10 kDa chaperonin, mitochondrial-like [Momordica charantia]7.4e-4392.78Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIP  NRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNL+PVSVKEGDTVLLP+YGGT VKLGEKEFHLFRDED+LGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
XP_022923512.1 10 kDa chaperonin, mitochondrial-like [Cucurbita moschata]4.2e-46100Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
XP_022990905.1 10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]2.7e-4597.94Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
XP_023550871.1 10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo]7.2e-4698.97Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
TrEMBL top hitse value%identityAlignment
A0A1S3CU36 10 kDa chaperonin-like3.4e-4190.62Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLH
        MAKRLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD NGNL+PV VKEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLH
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLH
A0A5D3E3M3 10 kDa chaperonin-like3.4e-4190.62Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLH
        MAKRLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD NGNL+PV VKEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLH
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLH
A0A6J1DEL3 10 kDa chaperonin, mitochondrial-like3.6e-4392.78Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIP  NRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNL+PVSVKEGDTVLLP+YGGT VKLGEKEFHLFRDED+LGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
A0A6J1E6B4 10 kDa chaperonin, mitochondrial-like2.0e-46100Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
A0A6J1JRD8 10 kDa chaperonin, mitochondrial-like1.3e-4597.94Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDR+GNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDED+LGTLHD
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
SwissProt top hitse value%identityAlignment
P34893 10 kDa chaperonin, mitochondrial8.8e-3975.26Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        M KRLIP FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD++G LIPVSVKEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH+
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
P61603 10 kDa heat shock protein, mitochondrial6.0e-1950Show/hide
Query:  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G++ + G + PVSVK GD VLLPEYGGT V L +K++ LFRD D+LG   D
Subjt:  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
P61604 10 kDa heat shock protein, mitochondrial6.0e-1950Show/hide
Query:  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G++ + G + PVSVK GD VLLPEYGGT V L +K++ LFRD D+LG   D
Subjt:  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
Q64433 10 kDa heat shock protein, mitochondrial3.5e-1950Show/hide
Query:  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G + ++G + PVSVK GD VLLPEYGGT V L +K++ LFRD D+LG   D
Subjt:  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
Q96539 10 kDa chaperonin1.5e-3875.26Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        M KRLIP FNR+L++ ++ P+KT +GILLPE ++KLNSGKV+AVGPG+RD++G LIPVSVKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTLH+
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
Arabidopsis top hitse value%identityAlignment
AT1G14980.1 chaperonin 106.3e-4075.26Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        M KRLIP FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD++G LIPVSVKEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH+
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
AT1G23100.1 GroES-like family protein1.4e-3978.35Show/hide
Query:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD
        MAKRLIP  NRVL+EKI+PPSKT +GILLPE S++LNSG+V+AVGPGARDR GNLIPVSVKEGD VLLPE+GGT VKLGEKEF L+RDED++ TLH+
Subjt:  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCGATTAATTCCATTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGTTGAA
CTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAACGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCA
CGTCGGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGTACTCTACATGATTGA
mRNA sequenceShow/hide mRNA sequence
TCTTCCAATAGCCACATAAAAGCACCTCTTCTCGTCGCCTTCCTACTCCAAAACCCTAATTCTTCGAGCACAGACGTTGCACGAACAATCAACTCAAAGACGAATGGCGA
AGCGATTAATTCCATTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGTTGAACTCCGGT
AAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAACGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGT
GAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGTACTCTACATGATTGATAGATTCATCCGACTCAATGGTGTGGTCGGATTGCGCTTTTTG
CAAGAGGAGCTCATTCTGGTACTCTGAGTTGATTCTCTTCTCTTCCATGTTGTAGCTTCTTATTCACTGCAATAATGAAGGTTGCCATCATTTTATGGTTAGTTTTCCAT
TTGGATAAGTCTTAATGGAAACTCTTTTCAGTTCATCGTTGCTTCTGTTGTGATTCCTTATCTTCATTCAGCATTTGTTTTGTTTTTCTAATGGGTTGGAGGAATAGAGA
ACTGTTGTATTTGATGGCTAAGGCTATTTTGTAGGAATTTGGGGGCTTTTTATAACATACGATTATGGAAATAAGATAGTTCTGAGTTGCTTCAATTACTTTGTTCTTCC
TATTTTGTTTCCACTCGTTCTAAATCCAATGAGATACATAATTATAGGACTTACATATTGAATAAAAAAACAGTCTTGTGCGATCGAATTATGATGTTATGGATGGTTAA
TCTTGTGTTAAGTCATGTTTGTATCACATGAAAGAGGAGAATGAGTTGGAGTAATTATGGGGTACAGTTGTTTATATAGCCAATGATTGTAATGTTCTCACTTCCTTACC
GAATACAAAAATTTT
Protein sequenceShow/hide protein sequence
MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDLLGTLHD