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Carg25269 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg25269
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCopper ion binding protein
Genome locationCarg_Chr16:8457086..8461298
RNA-Seq ExpressionCarg25269
SyntenyCarg25269
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577605.1 hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sororia]1.7e-93100Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK

Query:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
        QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
Subjt:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

XP_008448899.1 PREDICTED: uncharacterized protein LOC103490925 [Cucumis melo]1.1e-7985.47Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV
        MGDFSIQISSNLVNMLIDDT+KPKRKPRRNR      +K+PQVKVDQK+ SDDSG LKGSTSDGWPHQ PPLFLPIIPPVH AN ELDAIRS+LQESERV
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV

Query:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS
        VEKLQKQEDNM++EVTQRAK+LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Subjt:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS

XP_022923446.1 uncharacterized protein LOC111431139 [Cucurbita moschata]1.7e-93100Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK

Query:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
        QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
Subjt:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

XP_022965185.1 uncharacterized protein LOC111465118 [Cucurbita maxima]2.3e-9097.74Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSG+LKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVV+KLQK
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK

Query:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
        QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKL  SSVEK
Subjt:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

XP_038876833.1 uncharacterized protein LOC120069208 [Benincasa hispida]3.3e-8185.79Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR      +K+PQ+KVDQKH SDDSGMLKGSTSDGWP+Q PPLFLPIIPPVHSANPELDAIRS+LQESERV
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV

Query:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
        VEKLQKQEDNM++EVTQRAK+LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPN+ LKCA LVK+FENCNRQARQ++  SSVEK
Subjt:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

TrEMBL top hitse value%identityAlignment
A0A0A0L5M8 Uncharacterized protein5.7e-7984.36Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRT------KEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRN+       K+PQVKVDQKH SDDSG LKGSTSDGWPHQ  P+FLPIIPPVH AN ELDAIRS+LQ+SERV
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRT------KEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV

Query:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS
        V+KLQKQEDNM++EVTQRAK+LHDKEFKLPYQKPMPCVAES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Subjt:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS

A0A1S3BKT1 uncharacterized protein LOC1034909255.1e-8085.47Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV
        MGDFSIQISSNLVNMLIDDT+KPKRKPRRNR      +K+PQVKVDQK+ SDDSG LKGSTSDGWPHQ PPLFLPIIPPVH AN ELDAIRS+LQESERV
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV

Query:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS
        VEKLQKQEDNM++EVTQRAK+LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Subjt:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS

A0A5D3D7J8 Uncharacterized protein5.1e-8085.47Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV
        MGDFSIQISSNLVNMLIDDT+KPKRKPRRNR      +K+PQVKVDQK+ SDDSG LKGSTSDGWPHQ PPLFLPIIPPVH AN ELDAIRS+LQESERV
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERV

Query:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS
        VEKLQKQEDNM++EVTQRAK+LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Subjt:  VEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS

A0A6J1E6U2 uncharacterized protein LOC1114311398.2e-94100Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK

Query:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
        QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
Subjt:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

A0A6J1HN12 uncharacterized protein LOC1114651181.1e-9097.74Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
        MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSG+LKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVV+KLQK
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK

Query:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
        QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKL  SSVEK
Subjt:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G12340.1 copper ion binding8.5e-3545.61Show/hide
Query:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK
        MGDFSIQISS L+N L +  ++PKR+ ++ +   P+V    K  ++     K +     P Q PP F P IPP  +A+ EL++I+S+++ESE+V+EKL+ 
Subjt:  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQK

Query:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLS
        QE N+V+EVT+RAK+L +KEFK+P  KPMPC ++ EA  +CYK++    LKC+  VKSF++C R++RQ+++
Subjt:  QEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTAATATGTTAATTGATGATACCGAAAAACCGAAAAGAAAACCGAGAAGAAACAGAACCAAGGAACCCCAAGT
AAAGGTTGATCAGAAACATGTATCTGATGATTCTGGGATGCTCAAGGGAAGCACAAGTGATGGATGGCCTCACCAAGCTCCTCCACTCTTTCTTCCCATAATTCCGCCCG
TGCATTCTGCCAATCCAGAGCTAGACGCAATCCGATCCATCCTGCAAGAGAGCGAAAGGGTCGTCGAGAAGTTGCAGAAGCAGGAGGACAACATGGTGCAGGAAGTTACT
CAAAGGGCAAAGGAACTCCATGACAAGGAGTTCAAGCTCCCTTACCAAAAGCCCATGCCATGCGTGGCTGAGAGTGAAGCTTGCTTTCAATGCTACAAAGATCATCCCAA
TGACTCTTTGAAATGTGCTCATCTCGTAAAAAGTTTCGAAAACTGTAACCGTCAAGCTCGGCAGAAATTGAGCTCGAGCTCGGTCGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
AAGCACGATTGTTTCTGTATTGTGTTTCGTTATACAGGATTTGATTTTACGCTAGGGCTTACCTTTTCCACCTCTGAATCTGCTGCAGACGGAGCCGTGATCGTCACAGG
TAGTCTGCCTAGGAGCATAATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTAATATGTTAATTGATGATACCGAAAAACCGAAAAGAAAACCGAGAAGAAACA
GAACCAAGGAACCCCAAGTAAAGGTTGATCAGAAACATGTATCTGATGATTCTGGGATGCTCAAGGGAAGCACAAGTGATGGATGGCCTCACCAAGCTCCTCCACTCTTT
CTTCCCATAATTCCGCCCGTGCATTCTGCCAATCCAGAGCTAGACGCAATCCGATCCATCCTGCAAGAGAGCGAAAGGGTCGTCGAGAAGTTGCAGAAGCAGGAGGACAA
CATGGTGCAGGAAGTTACTCAAAGGGCAAAGGAACTCCATGACAAGGAGTTCAAGCTCCCTTACCAAAAGCCCATGCCATGCGTGGCTGAGAGTGAAGCTTGCTTTCAAT
GCTACAAAGATCATCCCAATGACTCTTTGAAATGTGCTCATCTCGTAAAAAGTTTCGAAAACTGTAACCGTCAAGCTCGGCAGAAATTGAGCTCGAGCTCGGTCGAGAAG
TAGGATTGCCATCTGCAATGAATCTTCTCTTGTACTGAGAATATTGTGATTCAAGTTCTCACTGAGAAAAGGAAAGAAAAAAACTGATTTAGCCAACAGAAATAACCCAA
GACATGACTGTTGGGGGTTCCTTTGATTCAATTTTGTGTGTTGTTTCTTGAATCGTATTGGCCAGCCTTTCTTTTAGGCTCTATGGGTGTACTTATATGTCATTCACTAC
CGTTCAAATCGGTTCGACTAGATGAGTGAACTCTTCCTCGTATCCTTCATAAAGATGGTTCATGGGGTTTCTTTTGCTTTTGGCATAGTGCCCCTAACGAGAGGCTTGCC
AACGTGCGTCTATTATTGAAATCACCCGACTAGAGAGTATCCCATCTTCTGAAAAATCGTGTGATATGGCTTGAACTTGTTGTGTGCGGATTGAATTAGAGCTCATATCT
ACTTTGAACAAATATTATGTATGTGTAACAGATTTCGCAACGAGCTTAGTTGACTCAATTATTGATAATATAGACTTTCAATTTTGTCCAACGGACTCTTAATATGCATA
AAT
Protein sequenceShow/hide protein sequence
MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVT
QRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK